XLOC_002000 (dre-mir-24-1)


Basic Information

Item Value
gene id XLOC_002000
gene name dre-mir-24-1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 15960835 ~ 15960914 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003900
ACCTGAGCTCCGGTGCCTTCTGAGCTGATATCAGTTGTAGTAAATCACTGGCTCAGTTCAGCAGGAACAGGAGTGTGGCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080923

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003900 True 80 miRNA 0.52 1 15960835 15960914

Neighbor

gene id symbol gene type direction distance location
XLOC_001999 dre-mir-27d coding upstream 6020 15954727 ~ 15954815 (+)
XLOC_001998 dre-mir-23b coding upstream 6176 15954579 ~ 15954659 (+)
XLOC_001997 NA coding upstream 7365 15937306 ~ 15953470 (+)
XLOC_001996 apba1b coding upstream 147556 15777064 ~ 15813279 (+)
XLOC_001995 NA coding upstream 278364 15682165 ~ 15682471 (+)
XLOC_002001 apbb1 coding downstream 6427 15967341 ~ 15997914 (+)
XLOC_002002 phax coding downstream 68346 16029260 ~ 16035413 (+)
XLOC_002003 lmnb1 coding downstream 75332 16036246 ~ 16056908 (+)
XLOC_002004 megf10 coding downstream 109073 16069987 ~ 16161040 (+)
XLOC_002005 prrc1 coding downstream 204619 16165533 ~ 16187800 (+)
XLOC_001985 NA non-coding upstream 864573 15096017 ~ 15096262 (+)
XLOC_002008 NA non-coding downstream 413946 16374860 ~ 16396280 (+)
XLOC_002011 CR790388.2 non-coding downstream 614164 16575078 ~ 16575175 (+)
XLOC_002017 NA non-coding downstream 1126340 17087254 ~ 17087788 (+)
XLOC_002019 BX324123.6 non-coding downstream 1159003 17119917 ~ 17120049 (+)
XLOC_002020 BX324123.5 non-coding downstream 1162454 17123368 ~ 17123500 (+)

Expression


Co-expression Network