XLOC_002004 (megf10)


Basic Information

Item Value
gene id XLOC_002004
gene name megf10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 16069987 ~ 16161040 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003911
GAAGGAGCGCAAGCGCGTCTGTGTTCATCACTCTATTCTTTGTGCGCTTCTGTGAAAATATTTGAGCTAATTTGGCGTTCATTTAAGCGGACCCCATGTGTTTGGACCGAACGAAAACTTTTGTTTAAAATTGGTGTTTCCTGAAATGATGTCATCCTGTGGTCCTCTTCTATTGGCTGTGTCATGCTGTTTGGTTGCTCTGACATCATCACTCAACCTGGATGACCCTAATGTCTGCAGTCACTGGGAAAGTTACTCAGTGACCGTGCAGGAGACGTACGCTCATCCGTTTGATCAAATCTACTACACCAGCTGCACGGACATCCTCAACTGGTTCAAATGCACTCAGCACAGAGTAAGCTACAGAACGGCCTATCGCAGGGGTGAGAAGACAATGCATCGACGCAAGTCTCAGTGCTGCCCAGGTTTCTATGAGAGTGGAGATATATGCGTTCCCCACTGTGCTGAGAAATGTGTGCATGGCCGCTGCGTGGCCCCCAACACCTGTCAGTGTGAGCCGGGCTGGGGAGGGGCTGACTGCTCCAGCGCGTGTGACCGTGATCACTGGGGCCCACACTGCAGTAGCCGGTGTCAGTGTAAGAACGAGGCGCTGTGTAACCCCATCACTGGAGCGTGCATATGTGCACCCGGGTACCATGGCTGGCGATGTGAAGACCTCTGTGACCATTCCACTTATGGCAACAATTGCCAACAGAAATGTCTGTGCCAGAATAATGCTACATGCCACCACATCACAGGCGAATGCGTGTGCAGTCCAGGATACACAGGAGCATTCTGTGAGGACTTGTGCCCTCCGGGAAAACATGGACAGCAATGTGAGGAGCGTTGTCCCTGTCAGAACGGTGGTGTGTGTCATCATGTGACTGGAGAATGTTCCTGTCCTGCTGGTTGGGGAATGGTGTGTGGACAACCCTGTCCGACGGGACGCTTTGGTAAGAACTGCTCACAGGAGTGTCAGTGTCATAATGGAGGAATCTGTTCGCCATCCACAGGACAGTGTGTGTGCAGTTCAGGATACACAGGAGAGAGGTGCCAAGATCAGTGCCAGGTTGGCACATATGGTATCGGCTGCAGCCAGGCATGTCGCTGTGTAAATGGCGCTCAGTGCTATCATGTGAGTGGAGCATGTTTGTGCGAGCAGGGATACACCGGAGAAAGCTGTGAGGAGCGCATTTGTCCGGATGGTCAATATGGCCTTAAGTGTGACAGGAAGTGCCCATGTAACACCAACAACACACGCAGtTGTCACCCAATGTCAGGTGAGTGTTCCTGCCAGTCGGGCTGGTCGGGGTTGTACTGTAATGAGACATGTGCTCCTGGTTTCTATGGGGAGGCCTGTCAGGAGGTCTGTCGCTGCCAGAATGGAGCCGACTGCCACAGTGTGAGCGGGGAATGTATCTGTGCACCGGGATATAAGGGCTCAGACTGTGCCATAGCCTGCCCTCCGGGTACATATGGCATCAACTGTACTTCTCTGTGTTCTTGTAAAAATGGAGCCATTTGTTCACCCATCGATGGATCATGTTCTTGTCAAGCAGGGTGGCATGGGGTGGACTGCTCAATTAACTGCCCCAGTGGAACGTGGGGTTTGGGCTGTAACCTGTCATGTGTGTGTGGTAATGGAGGCGCATGCAATGCTCTTGATGGCAAATGCACATGTACTCCAGGCTGGAGAGGAGACAGATGTGATCAACATTGTCAGGACGGGACATATGGATTGGATTGCCGTGAGCGTTGTGACTGCAGTCATGCAGATGGGTGTCACCCCTCAACTGGACACTGCCGCTGTCTAGCAGGCTGGACAGGCATTCATTGTGACAGTGTGTGTGCTGAGGGCCGCTGGGGGCCAAACTGCTCTCTGTCCTGTAACTGTAAAAACAGTGCGTCTTGCTCACCTGATGAAGGTGCATGCGAGTGTGCACCTGGATTCAGAGGAACCACCTGCCAACACATCTGTTCTCCGGGTGTCTTTGGCCACCGCTGTAGCCAGGCATGTCCACACTGTGTCCACAGCAATGGCCCCTGTCACCATGTGACCGGCCAGTGTGAATGTCTACCTGGTTTTAAAGGGGCACTCTGCAACGAAGTGTGTCCCAGTGGCAAGTTTGGCAAGAACTGTGGAGGGAGCTGCACCTGCACTAATAATGGCACTTGTAGCCCCATGGACGGCTCATGTCAGTGCTATCCCGGCTGGATTGGCAGTGACTGCTCACAGCCATGTCCTCCGGGTCAGTGGGGTCCCAACTGCATTCACACTTGCAACTGTCACAATGGAGCATTCTGCAGTGCTTATGACGGCGAGTGTAAATGTACGGCCGGCTGGACAGGTCTCTACTGCACACAAAGATGTCCATTGGGTTTCTATGGTAAGGATTGTGTGCAGGCATGTCAATGTGAGAATGGTGCAGACTGCAATCACATCTCGGGTCAGTGCACATGCCGTACAGGCTTCATGGGACGTCACTGTGAAACGAAATGTCCTGCGGGTTCATATGGATATGGCTGCCGGCAAGTTTGTGATTGTCTCAATAACTCCACCTGTGATCACATGACTGGCACATGTTACTGCAACCCGGGCTGGAAAGGCACACGATGTGATCAGGCTGGAGGGAATATTGCAGAAAGTCCCAATAGTTTGACAAGCGCAGCTCTGCCTATGGATTCATATCAAATTGGCGCAATCACAGGAATCATCATCCTTGTACTTCTTGTGCTCATCCTCCTCCTTCTGTTCATCATTTACCGCAAAAAACAGAAAGGCAAAGAATCCTCGATGCCTTCGGTCACGTATACACCTACTATGAGGGCCAACACTGATTACGCCATTGCAGAGTCACTCCCACAAACAGAGGTCCTTCCCAACAGTAACTATTTCTCCAACCCCAGCTACCACACGCTGACCCAATGCAGCAGCCCACCTCACATCAATAACATACCCTATGGAAAGatgaacaacaACCAGTTGTTTGTGAACCTGAAGAACACTGAGCCGAGGAAGCGGCTTTCCCTGCTGGATCACACAGGAACTCTACCAGCTGACTGGAAGCAAGGCGGATCCTTTAGTGAACTCGGAGCTTATGGAGTTGACAGGCGCTACATGGGAAAGTCGCTTCGAGATCTTGTGAAGAGTTTGCCCTATCATGCCAGTTCCTGCTCTCTGAATAGTTCAGAGAACCCATACGCCACCATCAAAGACCCTCCCCTGCTGTTGACCAAGAGCACTGAATGTGGTTATGTGGAAATGAAGTCTCCTGCTCACAGAGATTCACCATATGCTGAGATACATTCCTCCAGCCCTGCCAACAAAAATGTCTATGAAGTTGAGCCAACCATCAGTTCTGTCCAGGCACTTACAAACAACAACTGCAACGGGCCATTCTGTCAAGATCCATATGACTTACCAAAGAATAGTCACATTCCATGTCATTATGACCTACTGCCTACAAGAGACAGCAGCCCATCACCCACAGAGGACAGCAAATAAACACTCGCAAACTTCATTAATGGACCATTACTGTGTTTA
>TCONS_00003912
CTCTATTCTTTGTGCGCTTCTGTGAAAATATTTGAGCTAATTTGGCGTTCATTTAAGCGGACCCCATGTGTTTGGACCGAACGAAAACTTTTGTTTAAAATTGGTGTTTCCTGAAATGATGTCATCCTGTGGTCCTCTTCTATTGGCTGTGTCATGCTGTTTGGTTGCTCTGACATCATCACTCAACCTGGATGACCCTAATGTCTGCAGTCACTGGGAAAGTTACTCAGTGACCGTGCAGGAGACGTACGCTCATCCGTTTGATCAAATCTACTACACCAGCTGCACGGACATCCTCAACTGGTTCAAATGCACTCAGCACAGAGTAAGCTACAGAACGGCCTATCGCAGGGGTGAGAAGACAATGCATCGACGCAAGTCTCAGTGCTGCCCAGGTTTCTATGAGAGTGGAGATATATGCGTTCtccaaacactgaagagcaaatccatcgatgcgacACTCCACAAGTCCCGTACTATGCAAGCCAGTGatgacagcggcgaggaaaaaacttcaccaattgatgaaagtgaagggaaaaaaaaaacttgagagaaaccaggctcagctgggcacaaccatttcttctATGGCCAAACTTGCAGAGCTtcagtctaggtgccggaggctggagaaacCTGGACAtctatcgtggagaagctgcaggaggagaggtcaccggctggtTTACAAGCTGGCTTTTCTGGATCAATGCTAAGACTCGCCTGTCACTGGGGCCTTACCGGAATcaatctcatgctctccactaatccatgaccaccacagcagctgctca
>TCONS_00003914
atgtatttttgggTTTGTGTGAAGGTGTTTCCTGAAATGATGTCATCCTGTGGTCCTCTTCTATTGGCTGTGTCATGCTGTTTGGTTGCTCTGACATCATCACTCAACCTGGATGACCCTAATGTCTGCAGTCACTGGGAAAGTTACTCAGTGACCGTGCAGGAGACGTACGCTCATCCGTTTGATCAAATCTACTACACCAGCTGCACGGACATCCTCAACTGGTTCAAATGCACTCAGCACAGGTTAAGCTACAGAACGGCCTATCGCAGGGGTGAGAAGACAATGCATCGACGCAAGTCTCAGTGCTGCCCAGGTTTCTATGAGAGTGGAGATATATGCGTTCCCCACTGTGCTGAGAAATGTGTGCATGGCCGCTGCGTGGCCCCCAACACCTGTCAGTGTGAGCCGGGCTGGGGAGGGGCTGACTGCTCCAGCGCGTGTGACCGTGATCACTGGGGCCCACACTGCAGTAGCCGGTGTCAGTGTAAGAACGAGGCGCTGTGTAACCCCATCACTGGAGCGTGCATATGTGCACCCGGGTACCATGGCTGGCGATGTGAAGACCTCTGTGACCATTCCACTTATGGCAACAATTGCCAACAGAAATGTCTGTGCCAGAATAATGCTACATGCCACCACATCACAGGCGAATGCGTGTGCAGTCCAGGATACACAGGAGCATTCTGTGAGGACTTGTGCCCTCCGGGAAAACATGGACAGCAATGTGAGGAGCGTTGTCCCTGTCAGAACGGTGGTGTGTGTCATCATGTGACTGGAGAATGTTCCTGTCCTGCTGGTTGGATGGTACGCCTGGCTGTTACAGTTCTGAATGTGGCTCTCGTAAATATTAAAACTGAAATTTATAAGTTATATAGTTTCATCATGTTTGGCACTATTATTGCAGTCATTATGAAATGTCTTTGCATTGGAGGAAACATTCCATTATCCATTATGTCAGGAATGGTGTGTGGACAACCCTATCAGTGCCAGGTTGGCACATATGGTATCGGCTGCAGCCAGGCATGTCGCTGTGTAAATGGCGCTCAGTGCTATCATGTGAGTGGAGCATGTTTGTGCGAGCAGGGATACACCGGAGAAAGCTGTGAGGAGCGCATTTGTCCGGATGGTCAATATGGCCTTAAGTGTGACAGGAAGTGCCCATGTAACACCAACAACACACGCAGtTGTCACCCAATGTCAGGTGAGTGTTCCTGCCAGTCGGGCTGGTCGGGGTTGTACTGTAATGAGACATGTGCTCCTGGTTTCTATGGGGAGGCCTGTCAGGAGGTCTGTCGCTGCCAGAATGGAGCCGACTGCCACAGTGTGAGCGGGGAATGTATCTGTGCACCGGGATATAAGGGCTCAGACTGTGCCATAGCCTGCCCTCCGGGTACATATGGCATCAACTGTACTTCTCTGTGTTCTTGTAAAAATGGAGCCATTTGTTCACCCATCGATGGATCATGTTCTTGTCAAGCAGGGTGGCATGGGGTGGACTGCTCAATTAACTGCCCCAGTGGAACGTGGGGTTTGGGCTGTAACCTGTCATGTGTGTGTGGTAATGGAGGCGCATGCAATGCTCTTGATGGCAAATGCACATGTACTCCAGGCTGGAGAGGAGACAGATGTGATCAACATTGTCAGGACGGGACATATGGATTGGATTGCCGTGAGCGTTGTGACTGCAGTCATGCAGATGGGTGTCACCCCTCAACTGGACACTGCCGCTGTCTAGCAGGCTGGACAGGCATTCATTGTGACAGTGTGTGTGCTGAGGGCCGCTGGGGGCCAAACTGCTCTCTGTCCTGTAACTGTAAAAACAGTGCGTCTTGCTCACCTGATGAAGGTGCATGCGAGTGTGCACCTGGATTCAGAGGAACCACCTGCCAACACATCTGTTCTCCGGGTGTCTTTGGCCACCGCTGTAGCCAGGCATGTCCACACTGTGTCCACAGCAATGGCCCCTGTCACCATGTGACCGGCCAGTGTGAATGTCTACCTGGTTTTAAAGGGGCACTCTGCAACGAAGTGTGTCCCAGTGGCAAGTTTGGCAAGAACTGTGGAGGGAGCTGCACCTGCACTAATAATGGCACTTGTAGCCCCATGGACGGCTCATGTCAGTGCTATCCCGGCTGGATTGGCAGTGACTGCTCACAGCCATGTCCTCCGGGTCAGTGGGGTCCCAACTGCATTCACACTTGCAACTGTCACAATGGAGCATTCTGCAGTGCTTATGACGGCGAGTGTAAATGTACGGCCGGCTGGACAGGTCTCTACTGCACACAAAGATGTCCATTGGGTTTCTATGGTAAGGATTGTGTGCAGGCATGTCAATGTGAGAATGGTGCAGACTGCAATCACATCTCGGGTCAGTGCACATGCCGTACAGGCTTCATGGGACGTCACTGTGAAACGAAATGTCCTGCGGGTTCATATGGATATGGCTGCCGGCAAGTTTGTGATTGTCTCAATAACTCCACCTGTGATCACATGACTGGCACATGTTACTGCAACCCGGGCTGGAAAGGCACACGATGTGATCAGGCTGGAGGGAATATTGCAGAAAGTCCCAATAGTTTGACAAGCGCAGCTCTGCCTATGGATTCATATCAAATTGGCGCAATCACAGGAATCATCATCCTTGTACTTCTTGTGCTCATCCTCCTCCTTCTGTTCATCATTTACCGCAAAAAACAGAAAGGCAAAGAATCCTCGATGCCTTCGGTCACGTATACACCTACTATGAGGGCCAACACTGATTACGCCATTGCAGAGTCACTCCCACAAACAGAGGTCCTTCCCAACAGTAACTATTTCTCCAACCCCAGCTACCACACGCTGACCCAATGCAGCAGCCCACCTCACATCAATAACATACCCTATGGAAAGatgaacaacaACCAGTTGTTTGTGAACCTGAAGAACACTGAGCCGAGGAAGCGGCTTTCCCTGCTGGATCACACAGGAACTCTACCAGCTGACTGGAAGCAAGGCGGATCCTTTAGTGAACTCGGAGCTTATGGAGTTGACAGGCGCTACATGGGAAAGTCGCTTCGAGATCTTGTGAAGAGTTTGCCCTATCATGCCAGTTCCTGCTCTCTGAATAGTTCAGAGAACCCATACGCCACCATCAAAGACCCTCCCCTGCTGTTGACCAAGAGCACTGAATGTGGTTATGTGGAAATGAAGTCTCCTGCTCACAGAGATTCACCATATGCTGAGATACATTCCTCCAGCCCTGCCAACAAAAATGTCTATGAAGTTGAGCCAACCATCAGTTCTGTCCAGGCACTTACAAACAACAACTGCAACGGGCCATTCTGTCAAGATCCATATGACTTACCAAAGAATAGTCACATTCCATGTCATTATGACCTACTGCCTACAAGAGACAGCAGCCCATCACCCACAGAGGACAGCAAATAA
>TCONS_00003913
atgtatttttgggTTTGTGTGAAGGTGTTTCCTGAAATGATGTCATCCTGTGGTCCTCTTCTATTGGCTGTGTCATGCTGTTTGGTTGCTCTGACATCATCACTCAACCTGGATGACCCTAATGTCTGCAGTCACTGGGAAAGTTACTCAGTGACCGTGCAGGAGACGTACGCTCATCCGTTTGATCAAATCTACTACACCAGCTGCACGGACATCCTCAACTGGTTCAAATGCACTCAGCACAGGTTAAGCTACAGAACGGCCTATCGCAGGGGTGAGAAGACAATGCATCGACGCAAGTCTCAGTGCTGCCCAGGTTTCTATGAGAGTGGAGATATATGCGTTCCCCACTGTGCTGAGAAATGTGTGCATGGCCGCTGCGTGGCCCCCAACACCTGTCAGTGTGAGCCGGGCTGGGGAGGGGCTGACTGCTCCAGCGCGTGTGACCGTGATCACTGGGGCCCACACTGCAGTAGCCGGTGTCAGTGTAAGAACGAGGCGCTGTGTAACCCCATCACTGGAGCGTGCATATGTGCACCCGGGTACCATGGCTGGCGATGTGAAGACCTCTGTGACCATTCCACTTATGGCAACAATTGCCAACAGAAATGTCTGTGCCAGAATAATGCTACATGCCACCACATCACAGGCGAATGCGTGTGCAGTCCAGGATACACAGGAGCATTCTGTGAGGACTTGTGCCCTCCGGGAAAACATGGACAGCAATGTGAGGAGCGTTGTCCCTGTCAGAACGGTGGTGTGTGTCATCATGTGACTGGAGAATGTTCCTGTCCTGCTGGTTGGATGGTACGCCTGGCTGGAATGGTGTGTGGACAACCCTGTCCGACGGGACGCTTTGGTAAGAACTGCTCACAGGAGTGTCAGTGTCATAATGGAGGAATCTGTTCTGGAGCATGTTTGTGCGAGCAGGGATACACCGGAGAAAGCTGTGAGGAGCGCATTTGTCCGGATGGTCAATATGGCCTTAAGTGTGACAGGAAGTGCCCATGTAACACCAACAACACACGCAGtTGTCACCCAATGTCAGGTGAGTGTTCCTGCCAGTCGGGCTGGTCGGGGTTGTACTGTAATGAGACATGTGCTCCTGGTTTCTATGGGGAGGCCTGTCAGGAGGTCTGTCGCTGCCAGAATGGAGCCGACTGCCACAGTGTGAGCGGGGAATGTATCTGTGCACCGGGATATAAGGGCTCAGACTGTGCCATAGCCTGCCCTCCGGGTACATATGGCATCAACTGTACTTCTCTGTGTTCTTGTAAAAATGGAGCCATTTGTTCACCCATCGATGGATCATGTTCTTGTCAAGCAGGGTGGCATGGGGTGGACTGCTCAATTAACTGCCCCAGTGGAACGTGGGGTTTGGGCTGTAACCTGTCATGTGTGTGTGGTAATGGAGGCGCATGCAATGCTCTTGATGGCAAATGCACATGTACTCCAGGCTGGAGAGGAGACAGATGTGATCAACATTGTCAGGACGGGACATATGGATTGGATTGCCGTGAGCGTTGTGACTGCAGTCATGCAGATGGGTGTCACCCCTCAACTGGACACTGCCGCTGTCTAGCAGGCTGGACAGGCATTCATTGTGACAGTGTGTGTGCTGAGGGCCGCTGGGGGCCAAACTGCTCTCTGTCCTGTAACTGTAAAAACAGTGCGTCTTGCTCACCTGATGAAGGTGCATGCGAGTGTGCACCTGGATTCAGAGGAACCACCTGCCAACACATCTGTTCTCCGGGTGTCTTTGGCCACCGCTGTAGCCAGGCATGTCCACACTGTGTCCACAGCAATGGCCCCTGTCACCATGTGACCGGCCAGTGTGAATGTCTACCTGGTTTTAAAGGGGCACTCTGCAACGAAGTGTGTCCCAGTGGCAAGTTTGGCAAGAACTGTGGAGGGAGCTGCACCTGCACTAATAATGGCACTTGTAGCCCCATGGACGGCTCATGTCAGTGCTATCCCGGCTGGATTGGCAGTGACTGCTCACAGCCATGTCCTCCGGGTCAGTGGGGTCCCAACTGCATTCACACTTGCAACTGTCACAATGGAGCATTCTGCAGTGCTTATGACGGCGAGTGTAAATGTACGGCCGGCTGGACAGGTCTCTACTGCACACAAAGATGTCCATTGGGTTTCTATGGTAAGGATTGTGTGCAGGCATGTCAATGTGAGAATGGTGCAGACTGCAATCACATCTCGGGTCAGTGCACATGCCGTACAGGCTTCATGGGACGTCACTGTGAAACGAAATGTCCTGCGGGTTCATATGGATATGGCTGCCGGCAAGTTTGTGATTGTCTCAATAACTCCACCTGTGATCACATGACTGGCACATGTTACTGCAACCCGGGCTGGAAAGGCACACGATGTGATCAGGCTGGAGGGAATATTGCAGAAAGTCCCAATAGTTTGACAAGCGCAGCTCTGCCTATGGATTCATATCAAATTGGCGCAATCACAGGAATCATCATCCTTGTACTTCTTGTGCTCATCCTCCTCCTTCTGTTCATCATTTACCGCAAAAAACAGAAAGGCAAAGAATCCTCGATGCCTTCGGTCACGTATACACCTACTATGAGGGCCAACACTGATTACGCCATTGCAGAGTCACTCCCACAAACAGAGGTCCTTCCCAACAGTAACTATTTCTCCAACCCCAGCTACCACACGCTGACCCAATGCAGCAGCCCACCTCACATCAATAACATACCCTATGGAAAGGTGGGTAACTCtagtacagggTTGTTTGTGAACCTGAAGAACACTGAGCCGAGGAAGCGGCTTTCCCTGCTGGATCACACAGGAACTCTACCAGCTGACTGGAAGCAAGGCGGATCCTTTAATCTTGTGAAGAGTTTGCCCTATCATGCCAGTTCCTGCTCTCTGAATAGTTCAGAGAACCCATACGCCACCATCAAAGACCCTCCCCTGCTGTTGACCAAGAGCACTGAATGTGGTTATGTGGAAATGAAGTCTCCTGCTCACAGAGATTCACCATATGCTGAGATACATTCCTCCAGCCCTGCCAACAAAAATGTCTATGAAGTTGAGCCAACCATCAGTTCTGTCCAGGCACTTACAAACAACAACTGCAACGGGCCATTCTGTCAAGATCCATATGACTTACCAAAGAATAGTCACATTCCATGTCATTATGACCTACTGCCTACAAGAGACAGCAGCCCATCACCCACAGAGGACAGCAAATAA

Function

symbol description
megf10 Acts upstream of or within myofibril assembly. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Used to study myopathy. Human ortholog(s) of this gene implicated in early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome. Orthologous to human MEGF10 (multiple EGF like domains 10).

GO:

id name namespace
GO:0043277 apoptotic cell clearance biological_process
GO:0006909 phagocytosis biological_process
GO:0007517 muscle organ development biological_process
GO:0030239 myofibril assembly biological_process
GO:0007155 cell adhesion biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080506-1 Acts upstream of or within myofibril assembly. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Used to study myopathy. Human ortholog(s) of this gene implicated in early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome. Orthologous to human MEGF10 (multiple EGF like domains 10).

Ensembl:

ensembl_id ENSDARG00000017229

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003911 False 3544 mRNA 0.51 25 16069987 16161040
TCONS_00003912 False 797 lncRNA 0.48 5 16070017 16096373
TCONS_00003914 False 3429 mRNA 0.51 24 16092671 16161001
TCONS_00003913 True 3225 mRNA 0.52 23 16092671 16161001

Neighbor

gene id symbol gene type direction distance location
XLOC_002003 lmnb1 coding upstream 13079 16036246 ~ 16056908 (+)
XLOC_002002 phax coding upstream 34574 16029260 ~ 16035413 (+)
XLOC_002001 apbb1 coding upstream 72073 15967341 ~ 15997914 (+)
XLOC_002000 dre-mir-24-1 coding upstream 109073 15960835 ~ 15960914 (+)
XLOC_001999 dre-mir-27d coding upstream 115172 15954727 ~ 15954815 (+)
XLOC_002005 prrc1 coding downstream 4493 16165533 ~ 16187800 (+)
XLOC_002006 ctxn3 coding downstream 27721 16188761 ~ 16192613 (+)
XLOC_002007 slc12a2 coding downstream 64077 16225117 ~ 16310179 (+)
XLOC_002008 NA coding downstream 213820 16374860 ~ 16396280 (+)
XLOC_002009 slc27a6 coding downstream 340659 16501699 ~ 16540603 (+)
XLOC_001998 dre-mir-23b non-coding upstream 115328 15954579 ~ 15954659 (+)
XLOC_001997 NA non-coding upstream 116517 15937306 ~ 15953470 (+)
XLOC_001995 NA non-coding upstream 387516 15682165 ~ 15682471 (+)
XLOC_002011 CR790388.2 non-coding downstream 414038 16575078 ~ 16575175 (+)
XLOC_002017 NA non-coding downstream 926214 17087254 ~ 17087788 (+)
XLOC_002019 BX324123.6 non-coding downstream 958877 17119917 ~ 17120049 (+)
XLOC_002020 BX324123.5 non-coding downstream 962328 17123368 ~ 17123500 (+)

Expression


Co-expression Network