XLOC_001995



Basic Information


Item Value
gene id XLOC_001995
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 15682165 ~ 15682471 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005695
CTCACCGcctgatgagggacaataatgttaataaaaacacaggaaacacggagctgctgctgcttcacgtcagagtctgtgtattgtttttttaaatgaatgcacttAAAAGTATACTTTCACATTGTACAACAACATATGTAAACATCTTcacagatattatatatatacacatatcacAAAATAATCACATACATATTCCCTGCACATTACtgttataaattactataaagtAATTATATGATTCTTCCTAAATAAACTATTCACAGTTTAATTAttctataacacacacacataaaggctTATA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005695 True 307 lncRNA 0.30 1 15682165 15682471

Neighbor


gene id symbol gene type direction distance location
XLOC_001994 zfand5b coding upstream 68863 15603082 ~ 15613302 (+)
XLOC_001993 erbin coding upstream 83016 15454745 ~ 15599149 (+)
XLOC_001992 nln coding upstream 230948 15408501 ~ 15451217 (+)
XLOC_001991 trappc13 coding upstream 300040 15340768 ~ 15382125 (+)
XLOC_001990 kcnv2a coding upstream 368014 15310811 ~ 15314151 (+)
XLOC_001996 apba1b coding downstream 94593 15777064 ~ 15813279 (+)
XLOC_001997 NA coding downstream 254835 15937306 ~ 15953470 (+)
XLOC_001998 dre-mir-23b coding downstream 272108 15954579 ~ 15954659 (+)
XLOC_001999 dre-mir-27d coding downstream 272256 15954727 ~ 15954815 (+)
XLOC_002000 dre-mir-24-1 coding downstream 278364 15960835 ~ 15960914 (+)
XLOC_001985 NA non-coding upstream 585903 15096017 ~ 15096262 (+)
XLOC_001983 NA non-coding upstream 593639 15087993 ~ 15088526 (+)
XLOC_001981 NA non-coding upstream 633383 15047006 ~ 15048782 (+)
XLOC_001980 NA non-coding upstream 639417 15036271 ~ 15042748 (+)
XLOC_001973 BX000705.2 non-coding upstream 1750447 13930848 ~ 13931718 (+)
XLOC_002008 NA non-coding downstream 692389 16374860 ~ 16396280 (+)

Expression



Co-expression Network