XLOC_001998 (dre-mir-23b)


Basic Information

Item Value
gene id XLOC_001998
gene name dre-mir-23b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 15954579 ~ 15954659 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003898
GTGGCTGTGTGGGTTCTTGGCATGCTGATTTGTgactgtagtaaaaaaaaatcacattgccAGGGATTACCACACTACCAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081514

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003898 True 81 miRNA 0.44 1 15954579 15954659

Neighbor

gene id symbol gene type direction distance location
XLOC_001997 NA coding upstream 1109 15937306 ~ 15953470 (+)
XLOC_001996 apba1b coding upstream 141300 15777064 ~ 15813279 (+)
XLOC_001995 NA coding upstream 272108 15682165 ~ 15682471 (+)
XLOC_001994 zfand5b coding upstream 341277 15603082 ~ 15613302 (+)
XLOC_001993 erbin coding upstream 355430 15454745 ~ 15599149 (+)
XLOC_001999 dre-mir-27d coding downstream 68 15954727 ~ 15954815 (+)
XLOC_002000 dre-mir-24-1 coding downstream 6176 15960835 ~ 15960914 (+)
XLOC_002001 apbb1 coding downstream 12682 15967341 ~ 15997914 (+)
XLOC_002002 phax coding downstream 74601 16029260 ~ 16035413 (+)
XLOC_002003 lmnb1 coding downstream 81587 16036246 ~ 16056908 (+)
XLOC_001985 NA non-coding upstream 858317 15096017 ~ 15096262 (+)
XLOC_001983 NA non-coding upstream 866053 15087993 ~ 15088526 (+)
XLOC_001981 NA non-coding upstream 905797 15047006 ~ 15048782 (+)
XLOC_002008 NA non-coding downstream 420201 16374860 ~ 16396280 (+)
XLOC_002011 CR790388.2 non-coding downstream 620419 16575078 ~ 16575175 (+)
XLOC_002017 NA non-coding downstream 1132595 17087254 ~ 17087788 (+)

Expression


Co-expression Network