XLOC_002007 (slc12a2)


Basic Information

Item Value
gene id XLOC_002007
gene name slc12a2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 16225117 ~ 16310179 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003919
gtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattttttttttttttttttttttggttttttttttagatcacaGACAGAAGCAACCTTTGATATTAGTTATTGTATTGCCTTATTTGTACAATTAAAGACTGTGACAACTAGCACACATTCATTTAATATAgatgtatttattataatgtcACATAACAATGACAATCTGTTCGTGACTCAACTTCTCATTTGCCTCTGTGTGATCGGGCTGCTGTAGCCTCCGCCCCTGAACTCGAGAGATGGGGCGATCAAATCTCGCGAGTGCCTTTCCTCTCGCGATGTCACCCAGCATCGCTGTCCTGCTGCAGTGCGCGTATAAAGCAGCAAGACTGGCGGGCACGAGAGGAGGAGTTGCGGCAAGGTCGCGCAGCATCACGGCGCAATTTAGCCAAGGAAAGCTCGATTCATAGAGACTATCTGGGTCTGTAGAGTCCTTGCGAGAGCACACACCGGGCTGTGCGTTGGATGTTTCACTGAGCGTGTGTAACTTGTCAGGAGTTGTTGACTGGACGTGCTGCTGTTCTCCATTTGCATCCGCATGTGCGCGTCGCGCTGCGGGTTCAGAGGGAAGCGCGGCGCGTTGTTTTAGTCTTCCTGCAGCATCAGTGACTACGCTGGGTCACATCCATTGGCTCGTTTGCACTTTTATCGGACAGTATCAGCTTTGGGAAGGGTTTTTTGACTCACCATGTCGGCGTCACCTCCAATCTCCGCGGGCGATTATCTCTCTGCGCCCGAACCTGATGCGCTTAAACCCGCCGGTCCGACTCCGAGCCAGAGCCGCTTCCAGGTGGATCTGGTGACAGAGTCCGCAGGGGACGGTGAAACCACTGTCGGCTTCGACTCATCCCCACCCGAGTACGTTGCCGAGCCGCCGCCCGATGGGCTCCGGGATTCAGTATCTGGCGGCGAGGAAGCCAAGGGCCGGTTTCGGGTTGTGAACTTTGCGGCCTCAAGTCCGGACGCCGCGCCGGCGGAAACCGCGCAGAACGGGGACACGGTGATGAGCGAGGGCAGTTTGCACTCCTCCACCGGCGGCCAGCAGCACCATCACTACGATACACACACCAACACCTACTACCTCCGTACGTTCGGACACAACACCATCGACGCCGTGCCCAAGATCGACTTCTACCGGCAGACCGCCGCTCCGCTGGGCGAGAAACTCATTAGACCCACCCTCTCAGAACTGCACGACGAGCTGGACAAGGAGCCATTTGAGGATGGGTTTGCTAACGGCGAGGAGTTGACCCCTGCCGAGGAGTCTGCAGCTAAAGATGTATCAGAGTCTAAAGGAGTGGTGAAGTTCGGATGGATCAAGGGCGTGCTGGTGCGCTGCATGTTAAACATATGGGGTGTGATGCTCTTCATTCGAATGACATGGATCGTGGGCCAGGCTGGAATTGCATATTCCTGTATCATTGTTATTATGGCAACTGTTGTGACAACCATCACAGGCTGCTCGACTTCTGCGATTGCAACTAATGGCTTTGTACGAGgagGTGGAGCATATTACTTAATATCTCGAAGTCTGGGTCCAGAGTTTGGTGGCTCCATTGGTCTCATTTTTGCCTTTGCCAATGCTGTTGCTGTAGCCATGTATGTTGTGGGTTTTGCCGAAACTGTTGTTGAGCTACTCATGgACTCTGGTCTATTAATGATCGATCAAACAAATGACATCAGAGTCATTGGGACCATTACAGTCATTCTGCTTCTCGGCATTTCAGTGGCTGGAATGGAGTGGGAAGCCAAGGCCCAGATATTCCTATTGGTCATATTGATTACTGCCATTTTCAACTACTTCATTGGGTCCTTCATTGCTGTTGACTCGAAGAAGAAATTTGGCTTCTTTAGTTATGATGCTGGCATCTTGGCGGAAAATTTTGGTCCAGACTTTCGAGGACAGACGTTTTTCTCTGTTTTTTCCATCTTCTTCCCAGCAGCCACAGGCATTTTGGCTGGTGCCAACATCTCAGGAGATCTAGCAGACCCTCAAATGGCCATCCCAAAAGGAACGCTTTTGGCTATTCTCATAACAGGCCTTGTGTACGTGGGTGTGGCCATTTCTGCAGGTGCTTGCATCGTGCGTGATGCTACAGGAATCGAGAGTAACTTTACTCTCATTTCAAACTGTACTGATGCAGCCTGTAAGTATGGCTATGACTTCAGTTCCTGCAGACCTACGGTTGAAGGAGAAGTATCTTCCTGCAAGTTTGGTCTTCACAATGATTTCCAGGTTATGAGCGTGGTGTCAGGCTTCAGTCCTCTTATCAGTGCTGGGATTTTCTCTGCCACACTTTCCTCTGCCCTGGCATCTCTCGTCAGTGCCCCAAAAGTGTTTCAGGCTTTATGCAAAGACAATATCTATCCTGGAATTGCAATTTTTGGAAAGGGCTATGGCAAGAACAACGAGCCCCTGCGAGGATATTTTCTTACCTTTGGCATTGCGTTAGCTTTCATTCTAATTGCGGAGTTGAACGTCATTGCCCCAATCATTTCCAACTTTTTCCTGGCATCATACGCTCTCATCAACTTCTCGGTGTTTCACGCTTCGCTGGCCAATTCCCCTGGATGGAGGCCAAGCTTCAAGTACTACAACATGTGGGCGTCTCTGGCCGGGGCAATCCTATGTTGTGTTGTCATGTTTATCATCAATTGGTGGGCAGCGCTTTTGACCAACGTCATTGTCTTATCCCTTTACATCTACGTCAGCTACAAAAAACCAGATGTGAATTGGGGTTCGTCAACTCAAGCTCTGACGTATCATCAGGCCTTAACACACAGTTTACAGCTGTGCGGAGTAGCTGACCACATTAAAACCTTCAGGCCACAGTGTCTGGTGATGACTGGGGCTCCAAACTCGCGTCCAGCTATTCTTCATCTGGTCCATGCCTTCACCAAAAATGTGGGGCTGATGTTATGTGGGCATGTGCGCATTAGTTCTCGACGGCCCAACTTCAAAGAGCTAAACAGCGATATGTTGCGTTACCAGAGGTGGCTCCTTAACAACAACTCCAAGGCCTTTTACACATGTGTCGTTGCTGAAGACCTCCGTCAAGGAACCCAGTACatgctgcaggcTGCTGGACTGGGTAGATTGAGGCCCAATACTCTGGTTATTGGTTTCAAAAATGACTGGCGCACTGGAGACATAAAGGAGGTTGAGACCTACATAAACCTAATACAtgaTGCGTTTGATTTTCAGTATGGTGTTGTCATTCTCAGACTGCGAGAGGGACTTGATATTTCTCACATTCAAGGTCAAGATGATTCTTCAGGTATGAAGGATGTGGTGGTTTCAGTGGACATAAGCAAAGACTCGGATGGAGACTCATCCAAACCCTCCTCCAAGGCCACCAGTGTTCAGAACAGCCCAGCGGTCCAGAAAGatgaggatgatgatggcAAAGCCCACACTCAGCCGCTGTTGAAGAAAGATAAAAAGAGCCCGACAGTTCCTCTAAATGTAGCTGATCAGAGGTTGTTGGATGCCAGTCAACAGTTTCAGCAGAAACAGGGGAAGGGGACAGTGGATGTGTGGTGGCTCTTTGATGACGGGGGTCTGACTCTACTGATCCCCTATCTTATCGCCAACAAGAAGAAATGGAAGGACTGTAAGATCCGCGTGTTCATCGGTGGGAAGATCAACAGAATAGACCATGACCGCAGAGCCATGGCCACCTTGCTCAGCAAGTTCAGGATCGATTTCTCTGACATCACAGTCCTTGGTGACATCAACACAAAGCCAAAGTCTGAGGGTTTGACAGAGTTTGCTGAAATGATCGAGCCATATAAACTGAGAGAAGATGACATGGAGCAGGAAGCTGCTGAGAAGCTGAAAAGCGAGGAACCCTGGAGGATCACAGACAATGAGCTGGAGCTCTACAAAGCCAAGgGTAACCGTCAGATCAGACTGAATGAGCTGTTGAAGGAGCACTCAAGCACAGCCAACCTCATTGTCATGAGTATGCCGCTGGCCAGGAAAGGAGCCGTCTCCAGTGCCCTTTATATGGCCTGGCTAGACACACTATCCAAAGACCTGCCGCCCATCCTCTTAGTGCGCGGGAACCATCAGAGCGTCCTCACGTTCTACTCTTAAAGAGCTCACAGACACAACTGCCCCCACGAGCACACATGTAACGAGTACAGCACCTCTGACTGATAACGATGATGATGAAGGTTTTAAAGATGCTGATAGACATTTTTCAACAAAGCCGAAACAAAAGGATGTTCCAGAGCAGTTCTTTTCTTCCACGCCGCAGACGTAAAACGGGAAAGATCAACGCTTGGTGGTTTCTCTAGTCTTCAGCTCAAAGGTTTTAGAGCACACATTGTTACACTGATTGTTATCATTGTTATCATTGTTATGACTGTCACAACTTTTTGAgttgtggatatatatatatttttttcttttaaatttgctCTTGATGAAGCAATAATCACCTCATTTCTTATTTTCTCACTTTGAAGAAAAGCGTAATTCTTTGCAACACTTTTTATAGCCTTGTGGATGTGCCTTCCTGTGCAATCAGATTAAAATCTTAAACTTTCCCTGACTAATGATTTATAACGATCTAGATTTAGGCTGCTTGTTTTTATTGGGTTTTAAATGTAAATCGATCTTGATTTGATCACATTTTAACACAAGTGGACCGAAGGTCCCGCTGCGCCGTATTTGACAATACTTTTTCGCTTTTTTGTAGACGACTTTCCATCTGTTGATTTTTCTTCAGAGTTTTACGTCTTCCTTTTAGCATTGAATGAGTTGGAGTTTTAGTGCAGTGCCCCctccatgttgttgttgttgcgaTGGTCAACCTGAACTACGAGGTGATTACAATCATCTTTCATGTAGTCTAATGTAAAAAGTCAGAACTTTAACAAAACTATATTAGTTTTCCTTCGTGTGCAGTTAAACGGTTTTTGGTTtgacgattaaaaaaaaaaaaaagcggctGATGTGTGCTGTCTGAAGGAAGAGGCATCAGGTCATTTCAAAATAACAATAAGCCAAATAAGAGCAAAGCCCTGGAATCACAAATCCTGCTACAGAGGAGATCTTTGCCTTAACAGATGATGATGGTGAttgttgtttttactgttttcaaGCCATACTGGCTAGTTTATTGACTAGTATGCGAATGCAGATCAAAAGAGGAAGATTTAGAGATAGAAAATAGATGGACGGATGCCTGAACTAGAATGTAATCTTGACCACCACCTCATTAGTCTCCAAAAAGctctcatcttttttttttatgacataaAAAGGAGTCTGGAATTATTAATTTGTACAAGCTGATCTCTTGAAAACTCttgttttcagtttaaaatgCCACATTTCAACTATACATCCACGGTTGGACCGTTACAGTAACCAACCAAAGCTGGTCTTCCCTTgcttttatagtgttttttttggTCAGTGCATTTCTGCGGTTAAAGGCCTTAATGGAGATGAAGTGTTATTTAAAGCTGTAAGAATGTTTTCAGCGTTGAATGAAACTGATTTGTTCTTCTATGCAGATGGACTGCGTGCGACTCTTTGAAATCGTGTAATCTAAACTCAGGATTGAGTGCCGGGTTCATCTTAAACGTCGGAGATTCTGTCAGTTGTCTTGTTTTTCAGATGTCTGGACAGCCATTGAGAAAACTGCATTTCAGTTTCTCCTGTTCCTGAATGTTTGTCCAGTGGATGCTTGTGATTGAATGCTGGGATGTGACCAAATGTTTGTCGAATGGCCCGTCATGCCTTAGTTTAAAGTGGTTACTAACTGAAGTGTTGGTCGGTTAGCAACATGGGTAACTGTTTGCGCGTCCACCACATTAGCTCTTTGCGTTCGTCACGCCTTGGTTTCCAACACTACTTTCGTTTCCAGGCTcagtgtgtgttgtgctgttgcAGGTTCTGTGTACGTCGGATTCACAGCCCTGCCGTTTGTCCAATTAAGAAATGTGACAAAGTTAGAatgaatatattcatatttatagttCTCAGTATAAACTAGTATTTAAAAGTACTTAAATGTGTGTGCGCCGCATGTGTTTTGGTTTGAAGTGGGTGAAGTTAGTGAAGCTGACGGTACAATCCTACTCGTTGAAAATCTGTTCTGTGTTTGTACGTTGGTGTGGCTGTACAGCACTCATTCACCCAATCACGTTCAACTATTACCTGTCATCTTGATCGGTAAAGACGCTTGTGTATATATAATGTTTGGAGATTGTTGGGAGAGTGTCACAATCATATATTGCGTGTTTCTCACTGATGTAGAAATGCATCTAGTTGCAGCTGTAGGTTTCCATAATATGAGGTGCTTTAAAAGTGCCTCTTAAAGGTTCCACTGGTGTTTCCCGTAGACGAAcacttgtttttcttattttaccCTTGGCATGTGATAGCGTTTCTCACCTTGCAGAGTGTGTTGCCAAAGTCTCATTTGCATATTGCTACGTGTGAAAATTGAGTTAACACATCAAGGTCAAGAAGTTCCAGCTACAGTAGTTCACACTATACTTCCTCACTaacttgtatatatattttaacctaACCGGATTAATCAAAGAAGTGGATTAATGCAAATTAAAATGgtgaaacatatttatttaattatatattcttTGTTTCTCTCTTTTTCAACCCCTCTTATGTTACAGTAGTTTCAaaatgtgaagtttttttttttattattattgtttgcttgGATTTAGACAGCAAAATCTCATATTTGGTCTCTTTCTCAATGTTTGGTCACATTTCTATCTTTATATGCCTTTTAATGAAACACTCTGTTGACCAGTGGCTTGAGTTTTCTGCTAAACCATGAGGGTGGATCTGATCGATTGCGCTGGAACTGTAATGTTTTGATATACTGTACTGTTATTGTCACATATATGctttttttctaacattttaacGGTTAAGGGTATCGATGCTTTGTACATCCTTAttgcaatatataaaaataaactgaaatgaaaatcACTTGCTTGAGTATGTTTGAGTTATACAGTATTTCACCTATATTTAcacttatgtaaaataaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacacacacacacatacatacacacacacacacacacacacccacacacacacccatatatatatatatatacacatacatatatatatatatatatatatatatatatatatatacacacacacacacacacacacacacacacacacacacacacacacacacatatatacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatata
>TCONS_00003920
CGCAGCATCACGGCGCAATTTAGCCAAGGAAAGCTCGATTCATAGAGACTATCTGGGTCTGTAGAGTCCTTGCGAGAGCACACACCGGGCTGTGCGTTGGATGTTTCACTGAGCGTGTGTAACTTGTCAGGAGTTGTTGACTGGACGTGCTGCTGTTCTCCATTTGCATCCGCATGTGCGCGTCGCGCTGCGGGTTCAGAGGGAAGCGCGGCGCGTTGTTTTAGTCTTCCTGCAGCATCAGTGACTACGCTGGGTCACATCCATTGGCTCGTTTGCACTTTTATCGGACAGTATCAGCTTTGGGAAGGGTTTTTTGACTCACCATGTCGGCGTCACCTCCAATCTCCGCGGGCGATTATCTCTCTGCGCCCGAACCTGATGCGCTTAAACCCGCCGGTCCGACTCCGAGCCAGAGCCGCTTCCAGGTGGATCTGGTGACAGAGTCCGCAGGGGACGGTGAAACCACTGTCGGCTTCGACTCATCCCCACCCGAGTACGTTGCCGAGCCGCCGCCCGATGGGCTCCGGGATTCAGTATCTGGCGGCGAGGAAGCCAAGGGCCGGTTTCGGGTTGTGAACTTTGCGGCCTCAAGTCCGGACGCCGCGCCGGCGGAAACCGCGCAGAACGGGGACACGGTGATGAGCGAGGGCAGTTTGCACTCCTCCACCGGCGGCCAGCAGCACCATCACTACGATACACACACCAACACCTACTACCTCCGTACGTTCGGACACAACACCATCGACGCCGTGCCCAAGATCGACTTCTACCGGCAGACCGCCGCTCCGCTGGGCGAGAAACTCATTAGACCCACCCTCTCAGAACTGCACGACGAGCTGGACAAGGAGCCATTTGAGGATGGGTTTGCTAACGGCGAGGAGTTGACCCCTGCCGAGGAGTCTGCAGCTAAAGATGTATCAGAGTCTAAAGGAGTGGTGAAGTTCGGATGGATCAAGGGCGTGCTGGTGCGCTGCATGTTAAACATATGGGGTGTGATGCTCTTCATTCGAATGACATGGATCGTGGGCCAGGCTGGAATTGCATATTCCTGTATCATTGTTATTATGGCAACTGTTGTGACAACCATCACAGGCTGCTCGACTTCTGCGATTGCAACTAATGGCTTTGTACGAGgag
>TCONS_00003921
CTCACCATGTCGGCGTCACCTCCAATCTCCGCGGGCGATTATCTCTCTGCGCCCGAACCTGATGCGCTTAAACCCGCCGGTCCGACTCCGAGCCAGAGCCGCTTCCAGGTGGATCTGGTGACAGAGTCCGCAGGGGACGGTGAAACCACTGTCGGCTTCGACTCATCCCCACCCGAGTACGTTGCCGAGCCGCCGCCCGATGGGCTCCGGGATTCAGTATCTGGCGGCGAGGAAGCCAAGGGCCGGTTTCGGGTTGTGAACTTTGCGGCCTCAAGTCCGGACGCCGCGCCGGCGGAAACCGCGCAGAACGGGGACACGGTGATGAGCGAGGGCAGTTTGCACTCCTCCACCGGCGGCCAGCAGCACCATCACTACGATACACACACCAACACCTACTACCTCCGTACGTTCGGACACAACACCATCGACGCCGTGCCCAAGATCGACTTCTACCGGCAGACCGCCGCTCCGCTGGGCGAGAAACTCATTAGACCCACCCTCTCAGAACTGCACGACGAGCTGGACAAGGAGCCATTTGAGGATGGGTTTGCTAACGGCGAGGAGTTGACCCCTGCCGAGGAGTCTGCAGCTAAAGATGTATCAGAGTCTAAAGGAGTGGTGAAGTTCGGATGGATCAAGGGCGTGCTGGTGCGCTGCATGTTAAACATATGGGGTGTGATGCTCTTCATTCGAATGACATGGATCGTGGGCCAGGCTGGAATTGCATATTCCTGTATCATTGTTATTATGGCAACTGTTGTGACAACCATCACAGGCTGCTCGACTTCTGCGATTGCAACTAATGGCTTTGTACGAGgagGTGGAGCATATTACTTAATATCTCGAAGTCTGGGTCCAGAGTTTGGTGGCTCCATTGGTCTCATTTTTGCCTTTGCCAATGCTGTTGCTGTAGCCATGTATGTTGTGGGTTTTGCCGAAACTGTTGTTGAGCTACTCATGgACTCTGGTCTATTAATGATCGATCAAACAAATGACATCAGAGTCATTGGGACCATTACAGTCATTCTGCTTCTCGGCATTTCAGTGGCTGGAATGGAGTGGGAAGCCAAGGCCCAGATATTCCTATTGGTCATATTGATTACTGCCATTTTCAACTACTTCATTGGGTCCTTCATTGCTGTTGACTCGAAGAAGAAATTTGGCTTCTTTAGTTATGATGCTGGCATCTTGGCGGAAAATTTTGGTCCAGACTTTCGAGGACAGACGTTTTTCTCTGTTTTTTCCATCTTCTTCCCAGCAGCCACAGGCATTTTGGCTGGTGCCAACATCTCAGGAGATCTAGCAGACCCTCAAATGGCCATCCCAAAAGGAACGCTTTTGGCTATTCTCATAACAGGCCTTGTGTACGTGGGTGTGGCCATTTCTGCAGGTGCTTGCATCGTGCGTGATGCTACAGGAATCGAGAGTAACTTTACTCTCATTTCAAACTGTACTGATGCAGCCTGTAAGTATGGCTATGACTTCAGTTCCTGCAGACCTACGGTTGAAGGAGAAGTATCTTCCTGCAAGTTTGGTCTTCACAATGATTTCCAGGTTATGAGCGTGGTGTCAGGCTTCAGTCCTCTTATCAGTGCTGGGATTTTCTCTGCCACACTTTCCTCTGCCCTGGCATCTCTCGTCAGTGCCCCAAAAGTGTTTCAGGCTTTATGCAAAGACAATATCTATCCTGGAATTGCAATTTTTGGAAAGGGCTATGGCAAGAACAACGAGCCCCTGCGAGGATATTTTCTTACCTTTGGCATTGCGTTAGCTTTCATTCTAATTGCGGAGTTGAACGTCATTGCCCCAATCATTTCCAACTTTTTCCTGGCATCATACGCTCTCATCAACTTCTCGGTGTTTCACGCTTCGCTGGCCAATTCCCCTGGATGGAGGCCAAGCTTCAAGTACTACAACATGTGGGCGTCTCTGGCCGGGGCAATCCTATGTTGTGTTGTCATGTTTATCATCAATTGGTGGGCAGCGCTTTTGACCAACGTCATTGTCTTATCCCTTTACATCTACGTCAGCTACAAAAAACCAGATGTGAATTGGGGTTCGTCAACTCAAGCTCTGACGTATCATCAGGCCTTAACACACAGTTTACAGCTGTGCGGAGTAGCTGACCACATTAAAACCTTCAGGCCACAGTGTCTGGTGATGACTGGGGCTCCAAACTCGCGTCCAGCTATTCTTCATCTGGTCCATGCCTTCACCAAAAATGTGGGGCTGATGTTATGTGGGCATGTGCGCATTAGTTCTCGACGGCCCAACTTCAAAGAGCTAAACAGCGATATGTTGCGTTACCAGAGGTGGCTCCTTAACAACAACTCCAAGGCCTTTTACACATGTGTCGTTGCTGAAGACCTCCGTCAAGGAACCCAGTACatgctgcaggcTGCTGGACTGGGTAGATTGAGGCCCAATACTCTGGTTATTGGTTTCAAAAATGACTGGCGCACTGGAGACATAAAGGAGGTTGAGACCTACATAAACCTAATACAtgaTGCGTTTGATTTTCAGTATGGTGTTGTCATTCTCAGACTGCGAGAGGGACTTGATATTTCTCACATTCAAGGTCAAGATGATTCTTCAGGTATGAAGGATGTGGTGGTTTCAGTGGACATAAGCAAAGACTCGGATGGAGACTCATCCAAACCCTCCTCCAAGGCCACCAGTGTTCAGAACAGCCCAGCGGTCCAGAAAGATAAAAAGAGCCCGACAGTTCCTCTAAATGTAGCTGATCAGAGGTTGTTGGATGCCAGTCAACAGTTTCAGCAGAAACAGGGGAAGGGGACAGTGGATGTGTGGTGGCTCTTTGATGACGGGGGTCTGACTCTACTGATCCCCTATCTTATCGCCAACAAGAAGAAATGGAAGGACTGTAAGATCCGCGTGTTCATCGGTGGGAAGATCAACAGAATAGACCATGACCGCAGAGCCATGGCCACCTTGCTCAGCAAGTTCAGGATCGATTTCTCTGACATCACAGTCCTTGGTGACATCAACACAAAGCCAAAGTCTGAGGGTTTGACAGAGTTTGCTGAAATGATCGAGCCATATAAACTGAGAGAAGATGACATGGAGCAGGAAGCTGCTGAGAAGCTGAAAAGCGAGGAACCCTGGAGGATCACAGACAATGAGCTGGAGCTCTACAAAGCCAAGgGTAACCGTCAGATCAGACTGAATGAGCTGTTGAAGGAGCACTCAAGCACAGCCAACCTCATTGTCATGAGTATGCCGCTGGCCAGGAAAGGAGCCGTCTCCAGTGCCCTTTATATGGCCTGGCTAGACACACTATCCAAAGACCTGCCGCCCATCCTCTTAGTGCGCGGGAACCATCAGAGCGTCCTCACGTTCTACTCTTAAAGAGCTCACAGACACAACTGC

Function

symbol description
slc12a2 Enables cation:chloride symporter activity and identical protein binding activity. Acts upstream of or within inner ear morphogenesis and swim bladder inflation. Located in basolateral plasma membrane. Is expressed in several structures, including mesoderm; nervous system; notochord; otic vesicle; and pharyngeal arch. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 78. Orthologous to human SLC12A2 (solute carrier family 12 member 2).

GO:

id name namespace
GO:0006884 cell volume homeostasis biological_process
GO:0043583 ear development biological_process
GO:0048798 swim bladder inflation biological_process
GO:0042472 inner ear morphogenesis biological_process
GO:0055064 chloride ion homeostasis biological_process
GO:0055075 potassium ion homeostasis biological_process
GO:0055078 sodium ion homeostasis biological_process
GO:0055085 transmembrane transport biological_process
GO:1902476 chloride transmembrane transport biological_process
GO:0015696 ammonium transport biological_process
GO:0006811 ion transport biological_process
GO:0035725 sodium ion transmembrane transport biological_process
GO:1990573 potassium ion import across plasma membrane biological_process
GO:0016020 membrane cellular_component
GO:0016323 basolateral plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016324 apical plasma membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function
GO:0008511 sodium molecular_function
GO:0008519 ammonium transmembrane transporter activity molecular_function
GO:0015377 cation molecular_function
GO:0015378 sodium molecular_function
GO:0015379 potassium molecular_function
GO:0015081 sodium ion transmembrane transporter activity molecular_function

KEGG:

id description
ko04970 Salivary secretion
ko04972 Pancreatic secretion
ko05110 Vibrio cholerae infection
ko01009 Protein phosphatases and associated proteins
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-040625-53 Enables cation:chloride symporter activity and identical protein binding activity. Acts upstream of or within inner ear morphogenesis and swim bladder inflation. Located in basolateral plasma membrane. Is expressed in several structures, including mesoderm; nervous system; notochord; otic vesicle; and pharyngeal arch. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 78. Orthologous to human SLC12A2 (solute carrier family 12 member 2).

Ensembl:

ensembl_id ENSDARG00000104573

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003919 False 7453 mRNA 0.43 27 16225117 16310179
TCONS_00003920 False 1137 mRNA 0.57 4 16225553 16264324
TCONS_00003921 True 3390 mRNA 0.50 26 16225870 16306917

Neighbor

gene id symbol gene type direction distance location
XLOC_002006 ctxn3 coding upstream 32504 16188761 ~ 16192613 (+)
XLOC_002005 prrc1 coding upstream 37317 16165533 ~ 16187800 (+)
XLOC_002004 megf10 coding upstream 64077 16069987 ~ 16161040 (+)
XLOC_002003 lmnb1 coding upstream 168209 16036246 ~ 16056908 (+)
XLOC_002002 phax coding upstream 189704 16029260 ~ 16035413 (+)
XLOC_002008 NA coding downstream 64681 16374860 ~ 16396280 (+)
XLOC_002009 slc27a6 coding downstream 191520 16501699 ~ 16540603 (+)
XLOC_002010 isoc1 coding downstream 237080 16547259 ~ 16563953 (+)
XLOC_002011 CR790388.2 coding downstream 264899 16575078 ~ 16575175 (+)
XLOC_002012 CR790388.1 coding downstream 274203 16584382 ~ 16587854 (+)
XLOC_002000 dre-mir-24-1 non-coding upstream 264203 15960835 ~ 15960914 (+)
XLOC_001999 dre-mir-27d non-coding upstream 270302 15954727 ~ 15954815 (+)
XLOC_001998 dre-mir-23b non-coding upstream 270458 15954579 ~ 15954659 (+)
XLOC_001997 NA non-coding upstream 271647 15937306 ~ 15953470 (+)
XLOC_001995 NA non-coding upstream 542646 15682165 ~ 15682471 (+)
XLOC_002017 NA non-coding downstream 777075 17087254 ~ 17087788 (+)
XLOC_002019 BX324123.6 non-coding downstream 809738 17119917 ~ 17120049 (+)
XLOC_002020 BX324123.5 non-coding downstream 813189 17123368 ~ 17123500 (+)

Expression


Co-expression Network