G53659


Basic Information

Item Value
gene id G53659
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 49285279 ~ 49285543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU59886
ctcgtcTACCTATCAAAGGCTAAATGAATGAATGAGGACTAGTCTAGACCAGATTCTGAGTGTTTCCTCTGTTTTGTTTGAAGGCTTTCAGCATGGTTTCTCACAGAGCTTTCTAGAATGTTTATATGTGATAGTGCATTTAAGAGCAAACATGATGTATTGGGTCACCTTTTGTACAATCCACCATTCCACAATCCACCATTCCATTTCATATCCAATGTTTAGATGCTGCATGGGCTCAAATATAATGTGCGGTGCACTGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59886 True 265 lncRNA 0.40 1 49285279 49285543

Neighbor

gene id symbol gene type direction distance location
LOC110524349 LOC106573123 coding upstream 470266 48804907 ~ 48815013 (+)
LOC110532376 NA coding upstream 486775 48759039 ~ 48798504 (+)
cttnbp2 cttnbp2 coding upstream 578710 48635495 ~ 48706569 (+)
LOC110524313 LOC106573128 coding upstream 688671 48591020 ~ 48596608 (+)
LOC110524302 LOC106573126 coding upstream 694365 48552081 ~ 48590914 (+)
LOC110524405 LOC106573116 coding downstream 150219 49435762 ~ 49440232 (+)
kitlg scf coding downstream 380989 49666532 ~ 49702958 (+)
LOC110524421 NA coding downstream 538367 49823910 ~ 49834003 (+)
LOC118964840 NA coding downstream 562077 49847620 ~ 49848979 (+)
LOC118964841 NA coding downstream 751980 50037523 ~ 50184257 (+)
G53654 NA non-coding upstream 2314 49282454 ~ 49282965 (+)
G53375 NA non-coding upstream 21200 49203295 ~ 49264079 (+)
G53382 cpa1 non-coding upstream 58395 49224538 ~ 49226884 (+)
G53352 NA non-coding upstream 110683 49174386 ~ 49174596 (+)
G53349 NA non-coding upstream 114730 49170341 ~ 49170549 (+)
G53678 NA non-coding downstream 15077 49300620 ~ 49300869 (+)
G53785 NA non-coding downstream 99034 49384577 ~ 49384906 (+)
G53790 NA non-coding downstream 108308 49393851 ~ 49394069 (+)
G53811 NA non-coding downstream 134045 49419588 ~ 49419789 (+)
G53817 NA non-coding downstream 138842 49424385 ~ 49424641 (+)
G53181 NA other upstream 391367 48893497 ~ 48893912 (+)
G52324 NA other upstream 902022 48380542 ~ 48383257 (+)
G52080 NA other upstream 1260321 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 2026381 47227246 ~ 47260224 (+)
LOC110524042 NA other upstream 2423815 46854230 ~ 46861465 (+)
LOC110524575 fgf3 other downstream 2164279 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 4380672 53632830 ~ 53705421 (+)
G59031 NA other downstream 4702597 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 4759306 54044813 ~ 54089850 (+)

Expression


Co-expression Network