Gene
RNA
| Item | Value |
|---|---|
| gene id | G53678 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49300620 ~ 49300869 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59905 | True | 250 | lncRNA | 0.40 | 1 | 49300620 | 49300869 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524349 | LOC106573123 | coding | upstream | 485607 | 48804907 ~ 48815013 (+) |
| LOC110532376 | NA | coding | upstream | 502116 | 48759039 ~ 48798504 (+) |
| cttnbp2 | cttnbp2 | coding | upstream | 594051 | 48635495 ~ 48706569 (+) |
| LOC110524313 | LOC106573128 | coding | upstream | 704012 | 48591020 ~ 48596608 (+) |
| LOC110524302 | LOC106573126 | coding | upstream | 709706 | 48552081 ~ 48590914 (+) |
| LOC110524405 | LOC106573116 | coding | downstream | 134893 | 49435762 ~ 49440232 (+) |
| kitlg | scf | coding | downstream | 365663 | 49666532 ~ 49702958 (+) |
| LOC110524421 | NA | coding | downstream | 523041 | 49823910 ~ 49834003 (+) |
| LOC118964840 | NA | coding | downstream | 546751 | 49847620 ~ 49848979 (+) |
| LOC118964841 | NA | coding | downstream | 736654 | 50037523 ~ 50184257 (+) |
| G53659 | NA | non-coding | upstream | 15077 | 49285279 ~ 49285543 (+) |
| G53654 | NA | non-coding | upstream | 17655 | 49282454 ~ 49282965 (+) |
| G53375 | NA | non-coding | upstream | 36541 | 49203295 ~ 49264079 (+) |
| G53382 | cpa1 | non-coding | upstream | 73736 | 49224538 ~ 49226884 (+) |
| G53352 | NA | non-coding | upstream | 126024 | 49174386 ~ 49174596 (+) |
| G53785 | NA | non-coding | downstream | 83708 | 49384577 ~ 49384906 (+) |
| G53790 | NA | non-coding | downstream | 92982 | 49393851 ~ 49394069 (+) |
| G53811 | NA | non-coding | downstream | 118719 | 49419588 ~ 49419789 (+) |
| G53817 | NA | non-coding | downstream | 123516 | 49424385 ~ 49424641 (+) |
| G53872 | NA | non-coding | downstream | 214741 | 49515610 ~ 49516080 (+) |
| G53181 | NA | other | upstream | 406708 | 48893497 ~ 48893912 (+) |
| G52324 | NA | other | upstream | 917363 | 48380542 ~ 48383257 (+) |
| G52080 | NA | other | upstream | 1275662 | 48006674 ~ 48024958 (+) |
| LOC110520864 | NA | other | upstream | 2041722 | 47227246 ~ 47260224 (+) |
| LOC110524042 | NA | other | upstream | 2439156 | 46854230 ~ 46861465 (+) |
| LOC110524575 | fgf3 | other | downstream | 2148953 | 51449353 ~ 51451460 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 4365346 | 53632830 ~ 53705421 (+) |
| G59031 | NA | other | downstream | 4687271 | 53988140 ~ 53988597 (+) |
| LOC110525327 | LOC106573036 | other | downstream | 4743980 | 54044813 ~ 54089850 (+) |
