XLOC_000203


Basic Information

Item Value
gene id XLOC_000203
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 14851622 ~ 15021422 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003049
GGAATATTAAGATTAAAAACTAATATATTAAGACTTAACAACTTACTGTCTTTTTCTGATTCGTGAGTGAATTCCTCCATCTTTGTATGTAAATGAGTCGAAACAAAGCAGCCTATTTGCGTCCTTCAGAGTGCGTTTGGAGGATTTGATCCGACTGAAACAACAGATGATGACGGAGAACCAGGAATGGAGAGAACCAGACACGAAGACCAGACATGGAAGCAGAAAAGACCAACAGTTGGAGAGAGACGCAGACACTGGAGATCGCTGAAGACAACGAAAGGCTGGAGTGGTACGGCAGGGTCGAAGAGATGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003049 True 316 lncRNA 0.43 3 14851622 15021422

Neighbor

gene id symbol gene type direction distance location
XLOC_000202 NA coding upstream 80968 14769501 ~ 14770654 (+)
XLOC_000201 CU138548.6 coding upstream 83952 14767576 ~ 14767670 (+)
XLOC_000200 CU138548.7 coding upstream 106883 14744645 ~ 14744739 (+)
XLOC_000199 CU138548.4 coding upstream 114058 14737470 ~ 14737564 (+)
XLOC_000198 CU138548.3 coding upstream 121232 14730296 ~ 14730390 (+)
XLOC_000204 NA coding downstream 51978 15073400 ~ 15073664 (+)
XLOC_000205 pcdh7a coding downstream 116479 15137901 ~ 15203357 (+)
XLOC_000206 itln1 coding downstream 183211 15204633 ~ 15224338 (+)
XLOC_000207 hgsnat coding downstream 204846 15226268 ~ 15257315 (+)
XLOC_000208 pi4k2b coding downstream 237219 15258641 ~ 15285455 (+)
XLOC_000209 NA non-coding downstream 400804 15422226 ~ 15436325 (+)
XLOC_000211 CU633160.1 non-coding downstream 1140682 16162104 ~ 16162220 (+)
XLOC_000213 CT573256.2 non-coding downstream 1437103 16458525 ~ 16458741 (+)
XLOC_000217 NA non-coding downstream 1650667 16672089 ~ 16674126 (+)

Expression


Co-expression Network