XLOC_000204


Basic Information

Item Value
gene id XLOC_000204
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 15073400 ~ 15073664 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002820
TACTCCTAGCACTTTTTGATCTTAAAGGAACTTCTTTTTGTTGGAAATAGGTTAATTTTACAAGTGACCTAGAGTctaattttaccatttttattcagcCAATCTTCGGGTCTGGCTAGAGCACTTTTAGtctagcttagcataaatcattaaatcagattagaccattagcatctcgttcaATAATTTCCAAAACAGGTTTTGATAATTTCCTAGTTAAAGCTTGACGCTTTTGTAGTTACTTTGTGTACTAAgaccat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002820 True 260 lncRNA 0.33 2 15073400 15073664

Neighbor

gene id symbol gene type direction distance location
XLOC_000203 NA coding upstream 51978 14851622 ~ 15021422 (+)
XLOC_000202 NA coding upstream 302746 14769501 ~ 14770654 (+)
XLOC_000201 CU138548.6 coding upstream 305730 14767576 ~ 14767670 (+)
XLOC_000200 CU138548.7 coding upstream 328661 14744645 ~ 14744739 (+)
XLOC_000199 CU138548.4 coding upstream 335836 14737470 ~ 14737564 (+)
XLOC_000205 pcdh7a coding downstream 64237 15137901 ~ 15203357 (+)
XLOC_000206 itln1 coding downstream 130969 15204633 ~ 15224338 (+)
XLOC_000207 hgsnat coding downstream 152604 15226268 ~ 15257315 (+)
XLOC_000208 pi4k2b coding downstream 184977 15258641 ~ 15285455 (+)
XLOC_000209 NA coding downstream 348562 15422226 ~ 15436325 (+)
XLOC_000211 CU633160.1 non-coding downstream 1088440 16162104 ~ 16162220 (+)
XLOC_000213 CT573256.2 non-coding downstream 1384861 16458525 ~ 16458741 (+)
XLOC_000217 NA non-coding downstream 1598425 16672089 ~ 16674126 (+)
XLOC_000218 CR377220.1 non-coding downstream 1695019 16768683 ~ 16768809 (+)

Expression


Co-expression Network