XLOC_021068 (BX908731.1)


Basic Information

Item Value
gene id XLOC_021068
gene name BX908731.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 17838913 ~ 17844117 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041406
ctaccttcctgcagatttcagttgctacccatatcaaacacacctaattaattggtcctaattaattggtttaggtgtgtttgatatggatagcaactgaaatctgcaggaggtGGTCGGCAGAGCAGGGAGGATGGCAAGGCGGATAGACTCCAAGGCGGTTGGCAACAACTGGAATGTGAGTGGACAGGAGAATGCAGACGGAAGTGACGAATCAGGAAATGAAGTAGGAGATATGGAAGTAGTTTGCGGGAACTATGAAAAATGGGACATGGTTAAAAACAACAAACGGAAAAAGAAACGAAGAAATAAATCTGATGAAAGTGATTCGGATAGATGCTCAGCCCTAGAGGAAACGGTGACAGTGGAATACAAGGTATTTGCTAAACCTGTGCAAGAAGGGGACACATTTGGAGGTATGAATCCGATACAACTAACCAAAACACTGCATAAGGAAATAGGTATAATAAAGAGTGCAAAAATCTTGAGAAACGGATCGATACTGATTTTCTGTAAAGATGAAAAACAGCAAGCTAAAGCAATTAAGGTGAATAAAATCAATGGAAAAAAAGTAGAATGTTCCAAGACAAACGGGAAAAGATATGTTAAAGGCGTTGTGACAGGAATTCCTGTCAATGTTTCGGCAGATGAAGTGAAAGCAAGCATAACAAATGCAAATGTGGTCGAAGCTAAACGCTTAAGAACAAACAGAAATGGAAGTGCTTGTGATAGTCTTTCTGTTATGGTCACATTTGATGAGGAGACACTCCCGAAAAAGATATTAATCGGGTATATGTGCTATGATGTAAGACTGTACATTCCCCCGCCCCTTCGGTGTTATAAATGTCAGAGATTTGGACATATAGCAGCTTTTTGCAAGGGAAAGCAAAGGTGTGGTAAATGTAGTGGGGAACACGAATATGGAAAATGTGAAGAGGGTGCAAAGTTGAAATGTTGCAACTGTGGAGGGGATCATAGCTCAGCGTATCGAGGGTGTGAGGTTAGCAAAAGGCAGGCAGAAGTACAAAGAGTAAAAGCTGTTCAAGGAATCAGCTATGCGGAAGCATTAAAAAAGGTTCCAGAAATTATGACTGTgtctaaacaaaatgaaaacaggaacaaaaatacAGAGACATGTCAAAAATGTGAACAACTGAAAGCGGAAACTCTGATAGTGAGCAAAAATGATTTTGTAATATTCATGGCAGAGATAATAAATTGTTCCGCTCAAACGAAAAGTAGGAATGAAAgaatcaaaataataatcaaatcagcAGAAAAATACCTGGATGTGAAGGATCTGCTCTGGGAAACGGTTAGGGACATCTTAAATGAAGATACACAATCATCCCAGCCTGGGGGAGGAACGTCTTAAATGTTAAACGTTCTACAATGGAATGCAAGAAGCTTAATTGCGAATGGccaagaatttaaaaaatatattgataatattataGAGAAACCTAATATAATATGCATACAAGAAACATGGTTAAAACCtcaattagattttaatattaaggGATATAATATAGTTAGAAATGATAGGAATCATAGCAGAGGAGGAGGAATTGCAACATTTATAAAAAGCGGAATGAAGTTTAGGAtagaacaaataaatacaaagtatGAATCAATTTTAATCAAGGTATGGACGGATAGAGGATGTATagacattattaattattataatccctgtgataaattaaatcaaaacataTTAGAAGAAGTAATGGGTGTACGACAAGACAGTGTTTTATGGTGTGGGGATTTTAATTCACATAATTCATTATGGGGGAGTAATAGTAATGATGCAAATGGGATTCTTCTTGAAGAATTTATAgatgaaaaatatttagtttgtcTAAATAATGGTGAAGGCACACggtataattgttttaaaaatacagaaagcgTACTAGACTTAACATTTATTAGTAGTTCATTAGCAGCGGTTAGCACATGGAAAGTACTCAAGCACAATACAATAGGTAGTGACCATTACCCAGTAGTAACTAAAATTGGATTAAAGATAATGTATGAAAAAGAAGATAGAATTCCAAGATGGAAATTGGAGAAAGTAAATTGGAAAGAATTTCAAGAATTATGTGATAAGAGAGTTAtgacaatacaaataataaaccagagagatgtaaacattttaaataataaaattgttaatGAAATAATTCAAGCAGCCGAAGAAATAATACCTAAAAGTAAAGGAGTTGGTTGTACTAAAAATGTACCTTGGTGGAATAATGATTGTAAAGCAGCTATTAAAGCAAGAAATAAAGCATTTAGACATCTTAAAAAACACCATTCACTGGAAGCTATGATCATGTATAAAAAGGCTCAGACAATATTAAGAAAAactattaaaacacaaaagcGTATATTCTGGAGAGAATATTGCAATAGTCTTGGACGAGAGGTACAATTATCAGAGGTGTGGGGTATGATTAGAAGAATGGCAGGTGTTAGACGAAATTATGAATTACCAGTGTTACAGTATGGCGATATAGTAGCGATCAGCAACCTAGAAAAGGCGGAACTATTAGTCCAACATTTTAGAAATGTACATAGTTCAGATAATCTCTCTGAAGAGGCTAGGAAATGCAGAAATACTACATTAACTAAACATCCTGATCTtttaaagaaagtaaaaacaacagaaaatccTTTAGATTTACAGTTTAATATGTTTGAATTAAAACGAGCAATCATTAGCGCAAGACAAACTGCCCCAGGTAAGGATGAAATATGCTATAAAATGTTGTCACACATGTCAGAGGCATCACTAGAAATAGtactaaatttatttaatcaaatttggGATATGGGTCAATTACCTATAGCATGGAAACAATCTATAGTAGTACCTATACTTAAACCAGGGAAAAATCCATCAGATCCTTCTAGCTATAGACCCATTTCACTGACATCCCACTTATGCAAAATAATGGAAAGAATGATTACAGAAagaattacatattttttagaAAGCAAAAACCTTTTTTCTCCATATCAGAGTGGGTTCCGCAGAGGCAGAAATACTATGGACTCAGTATTATGTTTGGAATCAGACATCAGGAAAGCACAGACTAACAAAGAAGTTGTGATAGCTATCTTTTTTGATATAGAAAAGGCATACGATATGCTTTGGAAAGAGGGATTGCTGATTAAATTAAAATCTTTAGGAGTCACTGGCAAAACATATAATTGGGTCATGGATTTCTTATTTGGAAGAAAAATACAAGTTAGGGTAGGAAAAGAATATTCACATGAATACACAGTGGAAAATGGAACTCCTCAAGGTAGTGTTTGCAGCCCATTATTGTTCAATATAATGATAAACGACATTTTCTCTCAGATTGAACAAAGTATAGGAAAATCATTGTATGCAGATGATGGGGCACTATGGATTAGAGGTCGGAATGTGTCATTTGtacaaaagaaaatacagaatGCAATATTTGAGGTAGAAAAATGGGCAAATAAATGGGGATTCAAACTATCTGTTGCAAAAACTCAGGTCATCTGTTTCTCAAGACGACATAAAACCATATCACTCGCTTTAAAACTATATGGACAACCACTAGAACAAGTAAAAACTGTAAGGTTTCTTGGGGTTTGGTTCGATGAAAAGCTGACATGGAAGGATCATCTGaataaaatcacagaaaaaagtaaaaaggTTATTAATGTACTTCGTTGCCTGTCAGGGCAAGAGTGGGGAGCGAGTAGAACATCACTACAAAATATATACTGGGCCCTCATGAGATCTGTTTTTGATTATGGATGTATAGCTTACATGTCGGCAGCAGAGTCAAACCTCAAAAAATTAGATGTATTACAAGCACAGGCCCTTAGAATCTGTAGTGGATCATTTAGAACCTCACCAGTTTCATCTATGCAGGTTGAAATGGGAGAAATGCCCTTAAGCATTAGGAGAATGAAATTAATGATGGCATATTGGGTTAACATTCAGGGACAAATTGAATCACATCCAACAAAAAGAACATTACTAGAATGTTGGGAGCATGAGGAAACTAATTTCATAAGTTTCGGATGGATAGCTGAGGCAAAAGCCAGAATAATTGGATTAGATCAACTGCAATACTGTAAGGCAGTCCCAATCCCATATATTCCGCCATGGTTTTTTCCATTACCTAAAGTAGATTTCAATATACAACAGGAGTTAAAAGATAACAATAATATTCTTCCAACAAAATATATAGTGCagaattatttagaaaaaaattataaagaatcaatatttttattcacAGATGGATCTAAAGACCCACAAACAGGCCATACAGGCGCAGCAGTGTATATCCCAGTTAATCAATACCATATTAAGAAAAGAATAACTAATAATATATCAGTATATACAACAGAGTTAATTGCAATACTAATTGCCCTGCAGTGGATTGAGGAGAATGACATATATAATGTAGTAATTGCATCAGATAGCTTTTCATCACTGGAAAGTATAAGATCTGGAAGGTCTTCATACAGAATggatattcttaataatatactCAGTAAgacatattatattaaaatgaaggGCAAATCAGTATATTTCATTTGGGTTCCTGCTCACGTAGGTGTGGAAGGTAATGAGAAGGCAGACTTTCTGGCCAAACAAGCTCTTAGAATTAGTAAAGTAAATCTAGAAGTCCCATTGAGCAAAGCAGAAGCTAAAATCATGATAAGAACATATGCACAATCAATATGGCAAGTACACTGGGATAACATTGATACAGGTAgacatttatataatatacagAAACAAGTTGGAACTGGGAGGAAGGAGAACAGAAATCGTAGGGAAGGAAGTATTATAACTCGGATGAGAATAGGTCACACTGGACTCAATCATACATTACATAAAATAGGGAAACACCCAACTGGGCAATGTATACATTGTAATCAACAAGAAACAATAGAACATATTTTATTTCACTGtagtaattataataaagaaCGAAACGATCTTATTCAGTCAGTTAAAAAGAGCAATCTTCAGCATTTTACATTGGCAGGTTTATTAGGAAACAAATCTAGTGAggtatataatgatataataaaatttattaaagaaACCCAGTTAGAGGAAAGAATATAGAGATAATATCAGAAGAATTGTTAGTCCACCCCATCCcccatttttattacattttattagtattataa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099201

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041406 True 5205 mRNA 0.35 1 17838913 17844117

Neighbor

gene id symbol gene type direction distance location
XLOC_021067 NA coding downstream 17465 17818823 ~ 17821448 (-)
XLOC_021066 SBNO2 coding downstream 57700 17691381 ~ 17781213 (-)
XLOC_021065 tjp3 coding downstream 150040 17657612 ~ 17688873 (-)
XLOC_021064 arhgap45b coding downstream 185770 17611836 ~ 17653143 (-)
XLOC_021063 gpx4a coding downstream 227171 17589608 ~ 17611742 (-)
XLOC_021069 ncanb coding upstream 20755 17864872 ~ 18116635 (-)
XLOC_021070 rfxank coding upstream 316213 18160330 ~ 18164835 (-)
XLOC_021071 si:ch211-125m10.6 coding upstream 330008 18174125 ~ 18179214 (-)
XLOC_021072 tmem161a coding upstream 386747 18230864 ~ 18241390 (-)
XLOC_021073 NA coding upstream 499195 18343312 ~ 18345189 (-)
XLOC_021055 NA non-coding downstream 384450 17452425 ~ 17454463 (-)
XLOC_021054 BX649327.1 non-coding downstream 413117 17425678 ~ 17425796 (-)
XLOC_021052 NA non-coding downstream 774230 17053203 ~ 17064683 (-)
XLOC_021051 NA non-coding downstream 829413 17004310 ~ 17009500 (-)
XLOC_021074 NA non-coding upstream 503961 18348078 ~ 18349774 (-)
XLOC_021077 NA non-coding upstream 697888 18542005 ~ 18546649 (-)
XLOC_021078 NA non-coding upstream 747582 18591699 ~ 18659957 (-)
XLOC_021079 BX649276.1 non-coding upstream 818982 18663099 ~ 18718920 (-)

Expression


Co-expression Network