G224821


Basic Information

Item Value
gene id G224821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11617251 ~ 11618294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257056
tcaatgtaaatagccttatggtctgtgaggggagtagtacaaatatttgtagtaacacaCTCACTATCAATACATTTGGATATAAGCCAAAAATATATTCTGGATTGTCTGGAACCTGTTTTGTTACTCCAAGTGAATGATCTTTCGGCcggaaacctctctctccatatatcagtAAGATCAAACTTTTCCATAAAAAGTATTAAACCCACATTCTGATTGGTTGGCCTACCTGGGGGCCATCTATCAGTTGAATTATCTATTGTAATGTTAAAGTCCCCTCCTATCAATAATAACAAATTGGGAAATTTAGATAACCAATGAAGTATATGTTTCTCTATAGATTCAAgcaactcatcattctcatgtttggtgttgtaccagtagaagtttacagtaatgagtgtaatgtcattgtaactgatcattctcatgtttggtgttgtaccagtagaagtttacagtaatgagtgtaatgccattgtaactgatcattctcatgtttggtgttgtacccgtagaagtttacagtaatgagcgtaatgtcattgtaactcatcattctcatgtttggtgttgtaccagTAGAAGTTgacagtaatgagtgtaatgtcattgtaactgatcattctcatgtttggtgttgtaccagtagaagtttacagtaatgagtgtaatgccattgtaactgatcattctcatgtttggtgttgtacccgtagaagtttacagtaatgagcgtaatgtcattgtaacttatcattctcatgtttggtgttgaacccgtagaagtttacagtaatgagcgtaatgtcattgtaacttaTCATTCTCATGTTTTGTGTTGTGCcagtagaagtttacagtaatgagtgtaatgtcattgtaactgatcattctcatgtttggtgttgtacccgtagaagtttacagtaatgagcgtaatgtcattgtaactgatcacaagacaaataaagtgaccaaaggggtcacattccgagtgtagaatattaccaccaaaggtatTTTTCATTGTAGTGACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257056 True 1044 lncRNA 0.36 1 11617251 11618294

Neighbor

gene id symbol gene type direction distance location
LOC110509335 NA coding downstream 2413 11613213 ~ 11614838 (-)
fam131bb fam131b coding downstream 68510 11503867 ~ 11548741 (-)
LOC110509245 LOC106576972 coding downstream 162885 11449258 ~ 11454366 (-)
LOC110509171 LOC100196661 coding downstream 180623 11433118 ~ 11436628 (-)
styk1b LOC106576787 coding downstream 184262 11424793 ~ 11432989 (-)
LOC110509576 LOC106576947 coding upstream 108990 11727284 ~ 11741584 (-)
LOC110509520 lag-3 coding upstream 157761 11776055 ~ 11779268 (-)
LOC110509592 LOC100136300 coding upstream 189819 11808113 ~ 11811663 (-)
c1r c1r/c1s coding upstream 201319 11819613 ~ 11825101 (-)
LOC110509614 ret1 coding upstream 240424 11858718 ~ 11862407 (-)
G224822 NA non-coding downstream 246 11616452 ~ 11617005 (-)
G224795 zyx non-coding downstream 28283 11580307 ~ 11588968 (-)
G224788 NA non-coding downstream 41726 11575163 ~ 11575525 (-)
G224783 NA non-coding downstream 47491 11569535 ~ 11569760 (-)
G224779 NA non-coding downstream 50737 11565287 ~ 11566514 (-)
G224800 NA non-coding upstream 28216 11646510 ~ 11659065 (-)
G224806 NA non-coding upstream 34969 11653263 ~ 11654318 (-)
G224797 LOC100135813 non-coding upstream 36585 11654879 ~ 11693327 (-)
G224848 NA non-coding upstream 75186 11693480 ~ 11693715 (-)
G224850 NA non-coding upstream 77321 11695615 ~ 11695860 (-)
G223969 LOC106605840 other downstream 338623 11275917 ~ 11278628 (-)
G223942 LOC106576860 other downstream 442884 11172120 ~ 11174367 (-)
znf628 LOC106605829 other downstream 543501 11068525 ~ 11079570 (-)
LOC110508724 prpf31 other downstream 1594048 10019313 ~ 10024005 (-)
G223070 NA other downstream 1602359 10012961 ~ 10014892 (-)
G224869 NA other upstream 134557 11752851 ~ 11753680 (-)
G224873 NA other upstream 177596 11795890 ~ 11796309 (-)
G224954 LOC106576536 other upstream 396632 12014926 ~ 12016101 (-)

Expression


Co-expression Network