G225266


Basic Information

Item Value
gene id G225266
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12662483 ~ 12664579 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257617
cccctgacattGTTATGCATCCCAATACTCAAAGGTCTTCCTTTTCTTATATCCTTTCCCTCTTCACCACctcACTGATGAGGGTCCAAGAGAAGAACACAGAAATAATGATGTATTTCTTATGTTACATGGttatgtctgtcagtgtgtgtgtatgatgatctgtggtgtatgtgtgagagaggcagCAGAAAGCCTCAGAAAGTCTTGAACCCTGTAACATTATTCCCCATCATACTTTTAGAACATTAAACCATGACCTCAGTCTCCTCCATAGTCATTGTGTGGCTATTAGTTATTAAAGGGGAATAATTACCAGATCTAAAGCTCCACAGGCTGTAATGAGAGGGCTCAGGGTGGTGTGGAGCTCTGTGTGGAGCTCTGGCAGGCGTCTGTGCTGCAGACAGCCAGTTCAACGTGATGTAGAGCAGGGAAGCTTTAGTCTCAGCCTCCCGGCAGCAGAGCCAAGCCCCCAGCAAGATGCTGCCCAGAATTACCAGATCAGGAAAAATCTCATTATGGAAGTAGTTCAATTAGGGATTTGTCATTCTAATACAGTCCTCCTTTATCTCTCTGTTGCATTCCTATTTTTTCTCTTACTCCTCTATctttctccatcgctctctcctttttctctctatcctctctctctcctcttcctttctctgtctgtgctatgaacagaggtaaagaggagaaAAGGCTTGGCAAGTATTCTCCAGGATAACAAGTCATTTCACATCGCAAAGCCTCTGATTATCATATACTTGGTATGATCATTTGTTCCTCTCACTTGCTGTAAGGACAGACCTctgcacgcgtgcacacacacacacacacatattatattATGCATATCTGACTTTGTTACAACTAATTTCCAGCCAAATCTGCTTTCTTCAAAGTCGTTTCAAAAGCAGCTACGGGGTCCCCAGAGGGACAAAACACCTCCTCCACACAGTAAACCTCAGGGGAGTGTTGTCTTCATAGTGTGTCGTGATCCACCACATTAGTCACATATATAGTCTTTATTTTTCTGTAACTTCCACTTAGAACAATGGTAACCAAACgacaaagacaacaacaaaaaaatctggaAAATCATATAATTCTCTGAGTCAGTTTTAAAGTCTTCTGTTGTTGTATGTTACATAGATTAAAGGTCCTCCACGATGTGGACTCCTCCTCCAGTGGTCACTGTCCAGAGAGGAAGAGTTGGACGCTCTAGATGAGAGTCTGTGGTACCATGGaaagggaaagatagagagatggagatagagagcggggagaacagagagagaccaacagagaaaccagtaggtCTGGCATCAAATTATATGAGTTACCTGACTACTTTATCCAGTGTAGCTCAGTCCTGATTGATCCACTGGTAAGTCAAGATAAGAACCGAGCAGCCATCTTCAGGTAAATCACAAAGACAGAACATAGTGGAGCATGGTTCTGTGAACAGACTGGGCTAACATCAGACCCAGCTGGGCAGTttctccttctGTATGGGTGTGTCTTTTGGTATCTGTGCAAATATATCATTTCCATTGCTTCATCACACGTCTCACAATGTCTTTGagccctctaattctctctctctctctttctccctccttctctccctgtagTTCCCTCCTGGAGGCAAATGTACAGAGGGTCAGAGAATAGTGTCACTGAGCAGCTCAAAACATCAGTTAAGTCACCATTAACTTGCCCCCATATACCCTCCAGCCCCTCCTAGATCGTCAGTCTTAGTCCTGCTTCCCCAGAAGGTCTGTGTCGGTGCTGCTCTGTGGGGGTGGTATGGGTAGGCAGGGTGCAGGGGTGCTGTGGGGGAGCCGCCGGGGGCtggacccccctcccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257617 True 1876 lncRNA 0.45 3 12662483 12664579

Neighbor

gene id symbol gene type direction distance location
LOC110509802 LOC106576373 coding downstream 223701 12432169 ~ 12438782 (-)
trnav-uac NA coding downstream 532237 12130171 ~ 12130246 (-)
LOC110509756 LOC106605861 coding downstream 549618 12111383 ~ 12112865 (-)
LOC110509720 LOC106576492 coding downstream 573012 12087174 ~ 12089471 (-)
LOC110503589 LOC106576508 coding downstream 575535 12077084 ~ 12086948 (-)
LOC110503604 LOC106605712 coding upstream 5910 12670489 ~ 12673805 (-)
LOC110505096 tigit coding upstream 23900 12688479 ~ 12690874 (-)
LOC110509848 LOC106575652 coding upstream 27053 12691632 ~ 12700659 (-)
LOC110505108 LOC106578919 coding upstream 62485 12727064 ~ 12732403 (-)
LOC118944453 LOC106605569 coding upstream 71174 12735753 ~ 12745687 (-)
G225267 grik5 non-coding downstream 296 12661975 ~ 12662187 (-)
G225283 NA non-coding downstream 1438 12660805 ~ 12661045 (-)
G225282 NA non-coding downstream 1812 12659696 ~ 12660671 (-)
G225281 NA non-coding downstream 2936 12659204 ~ 12659547 (-)
G225280 grik5 non-coding downstream 3599 12658663 ~ 12658884 (-)
G225284 NA non-coding upstream 1524 12666103 ~ 12666309 (-)
G225287 NA non-coding upstream 2783 12667362 ~ 12667570 (-)
G225290 NA non-coding upstream 4468 12669047 ~ 12669256 (-)
G225292 NA non-coding upstream 8477 12673056 ~ 12673590 (-)
G225345 LOC106578696 non-coding upstream 115344 12779923 ~ 12781221 (-)
G225171 LOC106605713 other downstream 189423 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 204692 12454388 ~ 12457791 (-)
G225099 NA other downstream 321517 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 581250 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 646382 12014926 ~ 12016101 (-)
G226124 NA other upstream 402294 13066873 ~ 13067357 (-)
G226187 NA other upstream 512599 13177178 ~ 13180272 (-)
G226224 NA other upstream 559305 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 679495 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 1262095 13909746 ~ 13927861 (-)

Expression


Co-expression Network