Gene
RNA
| Item | Value |
|---|---|
| gene id | G267580 |
| gene name | LOC106586243 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49908894 ~ 49909998 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304035 | True | 468 | lncRNA | 0.47 | 2 | 49908894 | 49909998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504188 | scrn3 | coding | upstream | 34677 | 49871807 ~ 49874217 (+) |
| LOC110520117 | LOC106586239 | coding | upstream | 42896 | 49862239 ~ 49865998 (+) |
| LOC118959582 | NA | coding | upstream | 141538 | 49757817 ~ 49767356 (+) |
| cdca7a | LOC106586236 | coding | upstream | 173432 | 49731876 ~ 49735462 (+) |
| zak | LOC106586235 | coding | upstream | 176957 | 49676929 ~ 49731937 (+) |
| LOC118944674 | NA | coding | downstream | 134720 | 50044718 ~ 50063834 (+) |
| hoxd13a | hoxd13aa | coding | downstream | 224697 | 50134695 ~ 50136597 (+) |
| hoxd12a | hoxd12 | coding | downstream | 229215 | 50139213 ~ 50141004 (+) |
| hoxd11a | hoxd11aa | coding | downstream | 234657 | 50144655 ~ 50146492 (+) |
| hoxd10a | hoxd10 | coding | downstream | 236813 | 50146811 ~ 50153227 (+) |
| G267547 | NA | non-coding | upstream | 41102 | 49867215 ~ 49867792 (+) |
| G267546 | NA | non-coding | upstream | 47240 | 49861376 ~ 49861654 (+) |
| G267503 | NA | non-coding | upstream | 114263 | 49791755 ~ 49794631 (+) |
| G267471 | NA | non-coding | upstream | 161192 | 49744473 ~ 49747702 (+) |
| G267427 | NA | non-coding | upstream | 294049 | 49614584 ~ 49614845 (+) |
| G267555 | NA | non-coding | downstream | 30786 | 49940784 ~ 49946014 (+) |
| G267594 | NA | non-coding | downstream | 45518 | 49955516 ~ 49955866 (+) |
| G267596 | NA | non-coding | downstream | 47075 | 49957073 ~ 49957381 (+) |
| G267608 | atf2 | non-coding | downstream | 65728 | 49975726 ~ 49976765 (+) |
| G267551 | atp5g2 | non-coding | downstream | 69218 | 49979216 ~ 49981768 (+) |
| G267529 | NA | other | upstream | 53392 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 353056 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 396419 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3076650 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 3724090 | 46184134 ~ 46184804 (+) |
| hoxd3a | hoxd3 | other | downstream | 252303 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 692304 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 988591 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1663982 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 3256954 | 53124656 ~ 53172428 (+) |
