Gene
RNA
| Item | Value |
|---|---|
| gene id | G268970 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50312512 ~ 50312731 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU305597 | True | 220 | lncRNA | 0.38 | 1 | 50312512 | 50312731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505268 | hoxd1aa | coding | upstream | 123818 | 50187165 ~ 50188694 (+) |
| hoxd3a | hoxd3 | coding | upstream | 128185 | 50162278 ~ 50184327 (+) |
| hoxd4a | hxd4a | coding | upstream | 140115 | 50169601 ~ 50172397 (+) |
| hoxd9a | hoxd9aa | coding | upstream | 153664 | 50155835 ~ 50158848 (+) |
| hoxd10a | hoxd10 | coding | upstream | 159285 | 50146811 ~ 50153227 (+) |
| LOC110520134 | ro32 | coding | downstream | 3339 | 50316070 ~ 50321294 (+) |
| LOC110520136 | NA | coding | downstream | 21569 | 50334300 ~ 50336340 (+) |
| agps | LOC106586249 | coding | downstream | 25436 | 50338167 ~ 50377090 (+) |
| osbpl6 | LOC106586252 | coding | downstream | 142308 | 50455039 ~ 50519865 (+) |
| gpr1 | LOC106586257 | coding | downstream | 276227 | 50588958 ~ 50592305 (+) |
| G268956 | NA | non-coding | upstream | 19619 | 50292685 ~ 50292893 (+) |
| G268877 | NA | non-coding | upstream | 79822 | 50232471 ~ 50232690 (+) |
| hoxd12a | hoxd12 | non-coding | upstream | 171598 | 50139213 ~ 50141004 (+) |
| G268714 | NA | non-coding | upstream | 209456 | 50102779 ~ 50103056 (+) |
| G268604 | NA | non-coding | upstream | 227355 | 50084110 ~ 50085157 (+) |
| G268938 | NA | non-coding | downstream | 8756 | 50321487 ~ 50322542 (+) |
| G268939 | NA | non-coding | downstream | 10038 | 50322769 ~ 50323146 (+) |
| G268936 | NA | non-coding | downstream | 10551 | 50323282 ~ 50324581 (+) |
| G268941 | NA | non-coding | downstream | 11952 | 50324683 ~ 50324958 (+) |
| G267529 | NA | other | upstream | 457010 | 49836617 ~ 49855502 (+) |
| G267381 | NA | other | upstream | 756674 | 49554498 ~ 49555838 (+) |
| G267358 | NA | other | upstream | 800037 | 49510803 ~ 49512475 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 3480268 | 46801058 ~ 46832288 (+) |
| LOC110520146 | ino80d | other | downstream | 289571 | 50601983 ~ 50618761 (+) |
| G269291 | rap2a | other | downstream | 585858 | 50898589 ~ 50900277 (+) |
| LOC110520169 | il1rl1 | other | downstream | 1261249 | 51573980 ~ 51582567 (+) |
| acvr2aa | LOC106586327 | other | downstream | 2854221 | 53124656 ~ 53172428 (+) |
| LOC110520187 | LOC106586325 | other | downstream | 2908696 | 53174264 ~ 53235027 (+) |
