G268998


Basic Information

Item Value
gene id G268998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 50391372 ~ 50391699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU305633
gcccttggttcactccagacctgactgccctcgaccagcacaaaaacatcctgtggcggactgcaatagcatcgaatagtccccgcgatatgcaactgttcagggaagtcaggaaccaatacacgcagtcaatcaggaaagctaaggccagcttcttcaggcagaaatttgcatcttgtagctccaactccaaaaagttctgggacactgtgaagtccatggagaacaagagcacctcctcccagctgcccactgcactgaggctaggtaacacggtcaccactgataaatccatgattatcgaaaacttcaacaagcatttctcaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305633 True 328 lncRNA 0.49 1 50391372 50391699

Neighbor

gene id symbol gene type direction distance location
agps LOC106586249 coding upstream 14282 50338167 ~ 50377090 (+)
LOC110520136 NA coding upstream 55464 50334300 ~ 50336340 (+)
LOC110520134 ro32 coding upstream 70078 50316070 ~ 50321294 (+)
LOC110505268 hoxd1aa coding upstream 202678 50187165 ~ 50188694 (+)
hoxd4a hxd4a coding upstream 218975 50169601 ~ 50172397 (+)
osbpl6 LOC106586252 coding downstream 63340 50455039 ~ 50519865 (+)
gpr1 LOC106586257 coding downstream 197259 50588958 ~ 50592305 (+)
LOC110520148 LOC106586260 coding downstream 203917 50595616 ~ 50601655 (+)
LOC110520146 ino80d coding downstream 210284 50601983 ~ 50618761 (+)
LOC110520157 LOC106586094 coding downstream 566315 50958014 ~ 50959445 (+)
G268997 NA non-coding upstream 1215 50389946 ~ 50390157 (+)
G268994 NA non-coding upstream 3979 50387170 ~ 50387393 (+)
G268987 NA non-coding upstream 21097 50369951 ~ 50370275 (+)
G268941 NA non-coding upstream 66414 50324683 ~ 50324958 (+)
G269003 NA non-coding downstream 7565 50399264 ~ 50399504 (+)
G269006 NA non-coding downstream 12728 50404427 ~ 50404724 (+)
G269009 NA non-coding downstream 17157 50408856 ~ 50409067 (+)
G269019 NA non-coding downstream 18324 50410023 ~ 50410250 (+)
G269022 NA non-coding downstream 23639 50415338 ~ 50415543 (+)
hoxd3a hoxd3 other upstream 208346 50162278 ~ 50184327 (+)
G267529 NA other upstream 535870 49836617 ~ 49855502 (+)
G267381 NA other upstream 835534 49554498 ~ 49555838 (+)
G267358 NA other upstream 878897 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 3559128 46801058 ~ 46832288 (+)
G269291 rap2a other downstream 506890 50898589 ~ 50900277 (+)
LOC110520169 il1rl1 other downstream 1182281 51573980 ~ 51582567 (+)
acvr2aa LOC106586327 other downstream 2775253 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 other downstream 2829728 53174264 ~ 53235027 (+)

Expression


Co-expression Network