XLOC_002226


Basic Information

Item Value
gene id XLOC_002226
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 31742998 ~ 31768953 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005719
TCATAGTTGAAATGGAGACAATCAACAAACAAGTGAAGATGTCCAAGTGCAATGGAGCAGTTGTTATTGGAGGCCTGAGACAGCATGCGGATCTCCTCCAGAAGAGACGGGCTGCTTTTAGAGGAAGAGACCCCGATatcatcctcctcctcttcctctgtcTCTCCAGGATCCGTCATCCAGAGAACAAGTGGCCATTCAAAGAGTGCTGACCTCTgaggacacacagacacaagccTATCAGCCTCCAGCCCCTGCAACAGCACCAAACTGGTACAGACTCATCGTCTACCCATATGTCATTGTCTGAAGAAGTTTTATTTCTGTGAAGGTTACATCTTAGCAAGAATATTTACCAAACCCTGAGAACCTGCAGCAGGCTTGTTTCTGTAATTCGTCAGATTTTCAGCCACAGGCTGAATTCTAGCGCAGGGACAGATTTTTGTCTGAATGCAAGCCAAGAACAAAAGCCACGGGCAATGAGAACACATCACAGCGggaaacagagaaaaaaaaacatgctaacaaatcATAAATCACTGCCGTATTTACAGCAAAATCTAAGAGTGTAACGAACATCATGCGTAAATACTGAAAATCCCaatttaatatcatttaaaagGTTACAACTGAAACTAAAGCACATATACACTATCTGCTCCTCCTAATATTTGTGCAGTTACAGTACAGCCTTAATCAGCGATGagattttaactgttttaaatcaACAAGAGCATGTGCTAAAATTAGACCCAGGGATTTTTTTTGTCCCATTTTGCGAGAGGCAGATTTGACAGCAATGAGAGCATGGTGACAGCCTGGCAGCGCAGACAAGTCAGGACAAACAAAAGCACTGAGGCGTATAAAAATTTGCTGAATAATTCACGGCCAAACCACggacacatgcacacagacacacagaccgACACTGGTGATGGACAAAGGGTGTTCTTACAGAATATGATTGGAAAGCCAGTTGGCGTGGATGTCAGACATGTCCTCACTTTTTGATTGACAGAGAGACAGCCAACTAGTTTGGCATATTTATCAGCACAACTATAACGGTGTATAACCTTGCAGAAGCCAATTAGATAAAGTGTCGTTCATTAAATATTCAGTCAAACCAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005719 True 1128 lncRNA 0.43 3 31742998 31768953

Neighbor

gene id symbol gene type direction distance location
XLOC_002224 esama coding upstream 16512 31646020 ~ 31726486 (+)
XLOC_002225 BX571852.1 coding upstream 50222 31692662 ~ 31692776 (+)
XLOC_002223 MSANTD2 coding upstream 108571 31624143 ~ 31634427 (+)
XLOC_002222 AL845320.2 coding upstream 397308 31344227 ~ 31345690 (+)
XLOC_002221 robo4 coding upstream 458208 31244619 ~ 31284790 (+)
XLOC_002227 foxo1b coding downstream 40273 31809226 ~ 31861474 (+)
XLOC_002228 NA coding downstream 100329 31869282 ~ 32041846 (+)
XLOC_002229 NA coding downstream 177884 31946837 ~ 31948544 (+)
XLOC_002230 si:ch211-266i6.3 coding downstream 281953 32050906 ~ 32058078 (+)
XLOC_002231 thap12a coding downstream 289739 32058692 ~ 32064405 (+)
XLOC_002219 CR925737.1 non-coding upstream 754894 30978386 ~ 30988104 (+)
XLOC_002218 CR925809.1 non-coding upstream 982954 30759929 ~ 30760044 (+)
XLOC_002217 BX957285.1 non-coding upstream 1006730 30736148 ~ 30736268 (+)
XLOC_002215 NA non-coding upstream 1831302 29893626 ~ 29911696 (+)
XLOC_002234 NA non-coding downstream 490790 32259743 ~ 32264298 (+)
XLOC_002235 CR388187.1 non-coding downstream 626827 32395780 ~ 32395896 (+)
XLOC_002237 NA non-coding downstream 815464 32584417 ~ 32592071 (+)

Expression


Co-expression Network