XLOC_022363


Basic Information

Item Value
gene id XLOC_022363
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 24608458 ~ 24611654 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044123
CCTGTGTTGTGCTCCACGTAGCGTTTTCAGACGCATGTTTTCATTTATATCTTTGacttgtatgtttattttatttagatggagtttttgtttaatttattaacgCGTTTTATTTGATTTTGCTACGCATCTGCAGTGATTTAATCATGACTCGTGACTAAACAAACAGCGGCTCGGCTTTATTTAGGTCTGTCAGGATTAAGCAGTAAATCAATGGTCTTGTGACAACATTTAGCATGTCTTGCTACCAACTACACCTCATCTCTCTCTGAGAGTTCAGCGTCTTGGGCAGAGGCGTCCAGATCGCCCTGCTCAGCCCCGGTCAGGATGTCCATGGGGGCTTCGGCGATCTCTCTGATGGTTTGGTCTTCTAATGCGAGCGCTGTGTCAAAGAGCAAGGGGGACGGCGGACACTGCAAACCCTCATCTTCAACATCAAGATCCTGCACGCCAAGAAATTTGAATAATTATCCACTCATGATTAATACTACATTTtgattctgttcattgttttatgttgtgATTTTAAACGACGTTTGGCCATTACTACTGGTTACAGAGTGCTGCAATGGTGACGTCAACATCAGGAAGACTAATTTGATTTACATTTCTGATTATTAAAAAATTCTAATGTAAAATATGACTTGTGGTACACACCACTTGTTTTTGTTCAATGTTTTGTTCTACAACGTACAtacaaaaacactgtaaaacccaacagtcaactttatcaaatgagtgtagttaactcaaaattgactgaatgttat

Function

GO:

id name namespace
GO:0031012 extracellular matrix cellular_component
GO:0062023 collagen-containing extracellular matrix cellular_component
GO:0032991 protein-containing complex cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044123 True 770 lncRNA 0.39 2 24608458 24611654

Neighbor

gene id symbol gene type direction distance location
XLOC_022362 tmem240a coding downstream 25852 24571812 ~ 24582606 (-)
XLOC_022361 NA coding downstream 60894 24545239 ~ 24547564 (-)
XLOC_022360 atp13a2 coding downstream 65506 24511417 ~ 24542952 (-)
XLOC_022359 NA coding downstream 99636 24507854 ~ 24508822 (-)
XLOC_022358 NA coding downstream 108330 24496153 ~ 24500128 (-)
XLOC_022364 NA coding upstream 49652 24661306 ~ 24666612 (-)
XLOC_022365 ctdsp2 coding upstream 57381 24669035 ~ 24682244 (-)
XLOC_022366 dre-mir-26b coding upstream 63553 24675207 ~ 24675303 (-)
XLOC_022367 sdf4 coding upstream 81879 24693533 ~ 24699400 (-)
XLOC_022368 syt6a coding upstream 191245 24802899 ~ 24856025 (-)
XLOC_022348 NA non-coding downstream 421282 24184521 ~ 24187176 (-)
XLOC_022345 NA non-coding downstream 492501 24057410 ~ 24115957 (-)
XLOC_022343 NA non-coding downstream 1159375 23379465 ~ 23449083 (-)
XLOC_022369 CU041397.1 non-coding upstream 237833 24849487 ~ 24849604 (-)
XLOC_022370 CR376748.1 non-coding upstream 268573 24880227 ~ 24926348 (-)
XLOC_022373 NA non-coding upstream 482219 25093873 ~ 25094328 (-)

Expression


Co-expression Network