XLOC_022370 (CR376748.1)


Basic Information

Item Value
gene id XLOC_022370
gene name CR376748.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 24880227 ~ 24926348 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044132
TACATGGTGACGTGATCTCAAGTTGGACTGTCCAAACTGTTGAACTGTATGGCGTGCGCACGCTTGTCGTCAAATACTTCACCATTATGATGAGATTTTCACTTCACTTTCTACATAATACGGCACTCTGAAACTTCACTGGAGAAGAAGAAAGAAACGGCCTGGCGCAAAGTCAAAGGTGCATGTCATCAAGTCTTCTCATGCActgaagCAGTGCAGATGACATCTGGATGCTTGTTATCAGTAAATCATTGCAAAGtaAAATCTCCCTTAACGCTGATTCCTCCTGGCAGTTCAGTTAAAGCGTGCCTTAAATACAACCGCCGACTGAATGTTCCACCCATATTAAAATCCCCATATATATCACACAGCCAGTGAACATGTAAACACCGTTAACAGCAAACCGCCAAAAATAATCACAGTCATCATAAAAGTGCAGTAATGAAGCTCCACATATTTGCCCTACAGAAGCGTCACTAAAGACTCACAAActgtccaaacacacacacacagacatgcacacaaacGACTCCCTCagctctctctcatacacacacatgggAACTCTGATCTCCGAGGACAAATTCAGCACTCGGGGACACATCGACCTGAGAAAAACAAGCCCAACGGTCATAATGAGAGGCTTTTTTTATTAGAGATGCACAAAAGAAGGCAGATGCTCGGCTTCGGATAATCACAGCCCTCCCTATTTGTTGCATGTCATCCGTGGATTCTGAGATCAAATGTGATGCAATCATGCGTCTTTGGAATAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094502

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044132 True 773 processed_transcript 0.44 4 24880227 24926348

Neighbor

gene id symbol gene type direction distance location
XLOC_022368 syt6a coding downstream 24202 24802899 ~ 24856025 (-)
XLOC_022369 CU041397.1 coding downstream 30623 24849487 ~ 24849604 (-)
XLOC_022367 sdf4 coding downstream 180827 24693533 ~ 24699400 (-)
XLOC_022365 ctdsp2 coding downstream 197983 24669035 ~ 24682244 (-)
XLOC_022366 dre-mir-26b coding downstream 204924 24675207 ~ 24675303 (-)
XLOC_022371 zbtb48 coding upstream 14951 24941299 ~ 24955155 (-)
XLOC_022372 avpr2aa coding upstream 112647 25038995 ~ 25050521 (-)
XLOC_022373 NA coding upstream 167525 25093873 ~ 25094328 (-)
XLOC_022374 CR847803.1 coding upstream 169220 25095568 ~ 25098913 (-)
XLOC_022375 idh3g coding upstream 195650 25121998 ~ 25135105 (-)
XLOC_022364 NA non-coding downstream 213615 24661306 ~ 24666612 (-)
XLOC_022363 NA non-coding downstream 268573 24608458 ~ 24611654 (-)
XLOC_022359 NA non-coding downstream 371405 24507854 ~ 24508822 (-)
XLOC_022376 NA non-coding upstream 376382 25302730 ~ 25304019 (-)
XLOC_022379 NA non-coding upstream 857347 25783695 ~ 25786084 (-)
XLOC_022380 BX005414.1 non-coding upstream 862784 25789132 ~ 25793093 (-)
XLOC_022392 CR855310.1 non-coding upstream 1749304 26675652 ~ 26675770 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_08904658_08904945 NA coding CI01000001 null 8904644 ~ 8905238 (-)