XLOC_022372 (avpr2aa)


Basic Information

Item Value
gene id XLOC_022372
gene name avpr2aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 25038995 ~ 25050521 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044136
CGCGACGTGGCTCTGGCTCAAGCTGAGATTGGAATTCTGGGTCTGGTTCTGGCTCTAACAACATTAGGGAACAGCTTTATACTGTGGGTTCTGCTAAGGCGACGTAAATACAACGCACCCATGCACCAGTTTATGGTCAATCTGTGTGTTGCAGACCTTGTGGTGGGATTTTTTCAGGTGCTCCCGCAGATGTTATGGGATATTACAGAGAGATTTCAGGGTCCTGATGTGCTGTGCCGCTCAGTGAAATACCTTCAGATTGTGGGAATGTTTGCATCCTCTTACATGATCGTTGCTATGACAGTGGACCGTCATAATGCCATCTGCTGCCCCCTGCAGGCTTACAAAGGAGGGGCAGTTTCACGCTGGAATACACCCATCATGGTAGCCTGGGGTCTGTCCCTTATTCTCAGTGTGCCGCAGGTGTTTATTTTCTCCAGGTCAGAGGTTTCTCCGGGGGTCTACGAGTGCTGGGGAAATTTTGCTGAGCCATGGGGGCTGAAAGCTTATGTCACCTGGATGACTGTAGCTGTGTTTGTGCTTCCTACCTTTATTATCACTGTTTGTCAGGTACTGCTAGTGCGAATATTCAAAGAGATTCATGACAACATCTATCTAAAGTCTGAACGCGTGGTTTCTGTGGATTTGAAGAAGAACCGGGTCATTTTTCACTTTCCCATCTTCAAAAAGCGAGCCAGGACAGCTATGTCCAAAACAGTTAAGATGACTTTGGTCATTGTGCTTGTCTATACCGTGTGCTGGTCACCATTCTTCATTGTCCAGCTGTGGGCTGCCTGGGATCCCAACCCTCCCGACCAAGGAGTGGCTTTCACCATCCTGATGCTGTTGGCCAGCCTGAACTCCTGTACCAACCCGTGGATCTACACGGCCTTCTCCAGCAGCGTGTCCCGTGAACTTCTCGCCCTGCTGCGCTGTCGGCCAAAAGTGCCCCGTAGGAGCTCATTGTACGACCACTCTAGTGATATAAACACCTCCACTACCAAGGACAACCAGTACTGA
>TCONS_00044138
ATGGAGACCTTCTCAAGAGAGCCAGGTTGGGAAGGATCCCCCCATGCGACCACAGCATGGACCAACTTCACCTCATCCTTATTCTCTGATCACACTGGACTTAACAGCACTTTCAGAGGAGGATCCTACTTCTGGCTGGTGTCTCAAAACAGCTCAATAAACCCCACTCAGAAGCCCGGGCCGGTCAAGATACGCGACGTGGCTCTGGCTCAAGCTGAGATTGGAATTCTGGGTCTGGTTCTGGCTCTAACAACATTAGGGAACAGCTTTATACTGTGGGTTCTGCTAAGGCGACGTAAATACAACGCACCCATGCACCAGTTTATGGTCAATCTGTGTGTTGCAGACCTTGTGGTGGGATTTTTTCAGGTGCTCCCGCAGATGTTATGGGATATTACAGAGAGATTTCAGGGTCCTGATGTGCTGTGCCGCTCAGTGAAATACCTTCAGATTGTGGGAATGTTTGCATCCTCTTACATGATCGTTGCTATGACAGTGGACCGTCATAATGCCATCTGCTGCCCCCTGCAGGCTTACAAAGGAGGGGCAGTTTCACGCTGGAATACACCCATCATGGTAGCCTGGGGTCTGTCCCTTATTCTCAGTGTGCCGCAGGTGTTTATTTTCTCCAGGTCAGAGGTTTCTCCGGGGGTCTACGAGTGCTGGGGAAATTTTGCTGAGCCATGGGGGCTGAAAGCTTATGTCACCTGGATGACTGTAGCTGTGTTTGTGCTTCCTACCTTTATTATCACTGTTTGTCAGGTGCGAATATTCAAAGAGATTCATGACAACATCTATCTAAAGAACTCTAAAAACACCACTAATAATGAGGACTCCAACACTTCCTCAGAGCCCTCTTTCCAACCATGCCCCCTGCATCCACCTCTTACAGGTGTGTCCAAGGCTATGTCCAAAACAGTTAAGATGACTTTGGTCATTGTGCTTGTCTATACCGTGTGCTGGTCACCATTCTTCATTGTCCAGCTGTGGGCTGCCTGGGATCCCAACCCTCCCGACCAAGGAGTGGCTTTCACCATCCTGATGCTGTTGGCCAGCCTGAACTCCTGTACCAACCCGTGGATCTACACGGCCTTCTCCAGCAGCGTGTCCCGTGAACTTCTCGCCCTGCTGCGCTGTCGGCCAAAAGTGCCCCGTAGGAGCTCATTGTACGACCACTCTAGTGATATAAACACCTCCACTACCAAGGACAACCAGTACTGA
>TCONS_00044137
ATGGAGACCTTCTCAAGAGAGCCAGGTTGGGAAGGATCCCCCCATGCGACCACAGCATGGACCAACTTCACCTCATCCTTATTCTCTGATCACACTGGACTTAACAGCACTTTCAGAGGAGGATCCTACTTCTGGCTGGTGTCTCAAAACAGCTCAATAAACCCCACTCAGAAGCCCGGGCCGGTCAAGATACGCGACGTGGCTCTGGCTCAAGCTGAGATTGGAATTCTGGGTCTGGTTCTGGCTCTAACAACATTAGGGAACAGCTTTATACTGTGGGTTCTGCTAAGGCGACGTAAATACAACGCACCCATGCACCAGTTTATGGTCAATCTGTGTGTTGCAGACCTTGTGGTGGGATTTTTTCAGGTGCTCCCGCAGATGTTATGGGATATTACAGAGAGATTTCAGGGTCCTGATGTGCTGTGCCGCTCAGTGAAATACCTTCAGATTGTGGGAATGTTTGCATCCTCTTACATGATCGTTGCTATGACAGTGGACCGTCATAATGCCATCTGCTGCCCCCTGCAGGCTTACAAAGGAGGGGCAGTTTCACGCTGGAATACACCCATCATGGTAGCCTGGGGTCTGTCCCTTATTCTCAGTGTGCCGCAGGTGTTTATTTTCTCCAGGTCAGAGGTTTCTCCGGGGGTCTACGAGTGCTGGGGAAATTTTGCTGAGCCATGGGGGCTGAAAGCTTATGTCACCTGGATGACTGTAGCTGTGTTTGTGCTTCCTACCTTTATTATCACTGTTTGTCAGGTGCGAATATTCAAAGAGATTCATGACAACATCTATCTAAAGTCTGAACGCGTGCGAGCCAGGACAGTCCGAGAGACAGCGCGGCGCTCAGGCATGCCGAGAGAAGCTATGTCCAAAACAGTTAAGATGACTTTGGTCATTGTGCTTGTCTATACCGTGTGCTGGTCACCATTCTTCATTGTCCAGCTGTGGGCTGCCTGGGATCCCAACCCTCCCGACCAAGGAGTGGCTTTCACCATCCTGATGCTGTTGGCCAGCCTGAACTCCTGTACCAACCCGTGGATCTACACGGCCTTCTCCAGCAGCGTGTCCCGTGAACTTCTCGCCCTGCTGCGCTGTCGGCCAAAAGTGCCCCGTAGGAGCTCATTGTACGACCACTCTAGTGATATAAACACCTCCACTACCAAGGACAACCAGTACTGA

Function

symbol description
avpr2aa Predicted to enable peptide binding activity and vasopressin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; positive regulation of vasoconstriction; and regulation of systemic arterial blood pressure by vasopressin. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in nephrogenic diabetes insipidus and nephrogenic syndrome of inappropriate antidiuresis. Orthologous to human AVPR2 (arginine vasopressin receptor 2).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0001992 regulation of systemic arterial blood pressure by vasopressin biological_process
GO:0045907 positive regulation of vasoconstriction biological_process
GO:0007165 signal transduction biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0042277 peptide binding molecular_function
GO:0005000 vasopressin receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-344 Predicted to enable peptide binding activity and vasopressin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; positive regulation of vasoconstriction; and regulation of systemic arterial blood pressure by vasopressin. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in nephrogenic diabetes insipidus and nephrogenic syndrome of inappropriate antidiuresis. Orthologous to human AVPR2 (arginine vasopressin receptor 2).

Ensembl:

ensembl_id ENSDARG00000007436

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044136 False 1020 mRNA 0.50 6 25038995 25050329
TCONS_00044138 False 1221 mRNA 0.50 6 25038995 25050521
TCONS_00044137 True 1185 mRNA 0.51 7 25038995 25050521

Neighbor

gene id symbol gene type direction distance location
XLOC_022371 zbtb48 coding downstream 83840 24941299 ~ 24955155 (-)
XLOC_022370 CR376748.1 coding downstream 112647 24880227 ~ 24926348 (-)
XLOC_022368 syt6a coding downstream 182970 24802899 ~ 24856025 (-)
XLOC_022369 CU041397.1 coding downstream 189391 24849487 ~ 24849604 (-)
XLOC_022367 sdf4 coding downstream 339595 24693533 ~ 24699400 (-)
XLOC_022373 NA coding upstream 43352 25093873 ~ 25094328 (-)
XLOC_022374 CR847803.1 coding upstream 45047 25095568 ~ 25098913 (-)
XLOC_022375 idh3g coding upstream 71477 25121998 ~ 25135105 (-)
XLOC_022376 NA coding upstream 252209 25302730 ~ 25304019 (-)
XLOC_022377 lrp1ab coding upstream 402135 25452656 ~ 25686954 (-)
XLOC_022366 dre-mir-26b non-coding downstream 363692 24675207 ~ 24675303 (-)
XLOC_022364 NA non-coding downstream 372383 24661306 ~ 24666612 (-)
XLOC_022363 NA non-coding downstream 427341 24608458 ~ 24611654 (-)
XLOC_022379 NA non-coding upstream 733174 25783695 ~ 25786084 (-)
XLOC_022380 BX005414.1 non-coding upstream 738611 25789132 ~ 25793093 (-)
XLOC_022392 CR855310.1 non-coding upstream 1625131 26675652 ~ 26675770 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_08990605_08998643 AVPR2AA coding CI01000001 null 8990590 ~ 8999534 (-)