XLOC_022897 (acaa1)


Basic Information

Item Value
gene id XLOC_022897
gene name acaa1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 20325312 ~ 20332460 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045522
CCAGGGAAGCAAGGTTCACCAGGAAACATCATCAGAAATGTAGAGCATAGTTcatttaacagtgcatgtcaaCCATTTGTGCAATTGTCGATTAACGGCTATCGTTTTATTTTTCCGTGTGCACattctcaacaataaaaatgcaAAGAGTAAACATTTTGTCGGGGCATCTAACGTCAAACAGACGTATGGGACTGAGGCAGTGCAGCGCAACAGCCGCGAACCCCAATGATATCGTTGTGGTTCACGGGCTCAGAACGGCCATCGGCCGGGCGAAGAGAGGCTCTTTTAAGGACACTACCCCTGATGAGCTGCTTAGTGCTGTGATGAGTGCAGTCATTAAAGATGTGGGACTCAAGCCCTCTTTACTAGGAGATGTGTGTGTTGgtAATGTTCTACAACCTGGGGCAGGTGCACTGATGGCTCGAGTTGCACATTTTTTTAGTGGCTTTCCAGAGTCCGTACCAGTCTATACTGTAAACAGGCAGTGCTCCTCTGGACTACAGGCACTTTTTAATATTGCAGgTGGAATCAGAGGAGGTTCCTATGACCTGGGACTTGCTTGTGGtgTTGAAAGCATGTCTCTACGTTCCCCGAATAACCCAGGAGACATCAGCCCCAGACTAATGGACAATGAGAAGGCTAGAGACTGCATCATTCCCATGGGAATAACCTCAGAGAATGTTGCTGAGAGATTTGGGATCACTAGGGAAAAACAGGATCGCTTTGCTCTCAGTTCCCAGCAAAAGGCAGCCATGGCACAGAAGAACGGCATATTTGATCAAGAGATCACACCAGTCACTACTAAATTTGTGGAGGAAAATGGCACTGAGCGCACCATTACTGTCACAAAGGATGATGGGATACGACCTGGGACTACATTAGAAGGCCTTGCCAAACTGCGACCGGCATTCAAGGACACCGGCAGCACCACAGCTGGTAATGCCAGTCAGGTGAGTGATGGCGCTGCAGCAGTGCTGATTGGCCGGAGATCTGCGGTTGAGAAACTGGGACTTCCTGTATTTGGGGTGCTGAGGGCAAGCGCTGTGGTGGGTGTTCCTCCGGATGTAATGGGCATCGGCCCAGCCTATGCAATCCCAGAAGCCCTCAAACTGGCTGGACTGACTGTGGATGATATTGATGTGTTTGAGATCAACGAAGCATTTGCCAGTCAGGCTGTGTATTGTGTGGAAAAACTGGGTATTCCAATGGAGAAAGTGAATCCAAATGGAGGAGCCATAGCTTTTGGTCATCCATTGGGCTGTACTGGTGCTCGACAGGTCGTGACTTTGCTCAATGAGCTCAAACGCAGACGGAAGagAGGATTTGGCGTGGTGTCTATGTGCATCGGAACTGGAATGGGAGCGGCAGCAGTTTTCGAGTATCCAGGACAGTGATCTTAAGATGCAAGTTACAGAGCAACTATTCTAAAATTCTCTTTAATTAAGCTGCTAGAACGCTAACTACAGAACACAAGTAGAGGGAGCACACTTGTTTATGTGCATAAAGTAGGTATAAGGTTGTAAGGATGGTAATGATACCTCTCATTCAAGTGCCTTGCATTTCAACTCTGATGCCTGTATCTAGTTAAGCAATCAGAATTACAACTTTTGTCTGTTTGATTTgcaacagaaatgttttttttttatgttgatatAACAGTAAAACTCAGAAATGATGattagaaaaaatgttttttaattaccCGTGTTGAGGACAAGTGTAATATGCTAAGATTTGTAATGCCTCTGATTTGTTAGAATAAAAAGGTTTGTAATGTT

Function

symbol description
acaa1 Predicted to enable acetyl-CoA C-acyltransferase activity. Predicted to be involved in fatty acid beta-oxidation and phenylacetate catabolic process. Predicted to be active in peroxisome. Is expressed in gut and liver. Orthologous to human ACAA1 (acetyl-CoA acyltransferase 1).

GO:

id name namespace
GO:0006635 fatty acid beta-oxidation biological_process
GO:0010124 phenylacetate catabolic process biological_process
GO:0005777 peroxisome cellular_component
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function
GO:0003988 acetyl-CoA C-acyltransferase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
ko00071 Fatty acid degradation
ko00592 alpha-Linolenic acid metabolism
ko01040 Biosynthesis of unsaturated fatty acids
ko00280 Valine, leucine and isoleucine degradation
ko04146 Peroxisome
ko03320 PPAR signaling pathway

ZFIN:

id description
ZDB-GENE-040704-48 Predicted to enable acetyl-CoA C-acyltransferase activity. Predicted to be involved in fatty acid beta-oxidation and phenylacetate catabolic process. Predicted to be active in peroxisome. Is expressed in gut and liver. Orthologous to human ACAA1 (acetyl-CoA acyltransferase 1).

Ensembl:

ensembl_id ENSDARG00000004687

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045522 True 1781 mRNA 0.45 12 20325312 20332460

Neighbor

gene id symbol gene type direction distance location
XLOC_022896 NA coding upstream 248016 20060772 ~ 20077296 (+)
XLOC_022895 NA coding upstream 270354 20054470 ~ 20054958 (+)
XLOC_022894 LIMD2 coding upstream 314489 19986432 ~ 20010823 (+)
XLOC_022893 CU638714.1 coding upstream 456523 19863246 ~ 19868789 (+)
XLOC_022892 NA coding upstream 610088 19704715 ~ 19715224 (+)
XLOC_022898 plcd1a coding downstream 40037 20372497 ~ 20419254 (+)
XLOC_022899 gars1 coding downstream 203596 20536056 ~ 20554969 (+)
XLOC_022900 hhatlb coding downstream 226549 20559009 ~ 20572170 (+)
XLOC_022901 klhl40b coding downstream 242799 20575259 ~ 20581672 (+)
XLOC_022902 sec22c coding downstream 326300 20658760 ~ 20675426 (+)
XLOC_022891 NA non-coding upstream 627866 19591878 ~ 19697446 (+)
XLOC_022887 NA non-coding upstream 1446332 18876733 ~ 18878980 (+)
XLOC_022903 CR931724.1 non-coding downstream 455708 20788168 ~ 20788284 (+)
XLOC_022904 NA non-coding downstream 584285 20916745 ~ 20918412 (+)
XLOC_022912 CU915780.1 non-coding downstream 940152 21272612 ~ 21272728 (+)
XLOC_022913 NA non-coding downstream 975107 21307567 ~ 21308014 (+)
XLOC_022915 AL929009.1 non-coding downstream 1169399 21501859 ~ 21502569 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_03883336_03887135 ACAA1 coding CI01000018 null 3882762 ~ 3887214 (+)