G380215


Basic Information

Item Value
gene id G380215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23543346 ~ 23543821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU432206
gcaccagtgactcctgtggcgggccgggcgcagtgcgcgctagccaaggttgccgggtgcacggtgttggatgtgcgctgtgttaagaagcagtgcggctaggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacaacaattggacaccacgaaattggggagaaaaaggggtaaaaaaaaagaaagaaaaaaaaagaacccaatgcatatgggtccggtaCATTTTGTAAATGCTCAGTGAATTAAAATGCTGCTGGTCAAATGTCCAGCGCAAAATTTTCCAAAACGGAAACCCTGACCCACAGGACCAAGGAGagcagaggatagagaggaggaggagagagagagagaagacaacagtTGAGTCTGCCTCCCTATAAAACACTCCCCCACACACTGTTTTAACTCGGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU432206 True 476 lncRNA 0.50 1 23543346 23543821

Neighbor

gene id symbol gene type direction distance location
LOC110523459 f2r coding downstream 82745 23456339 ~ 23512866 (-)
LOC110523458 LOC106568234 coding downstream 87982 23450567 ~ 23455364 (-)
LOC110523457 LOC106568234 coding downstream 107287 23426591 ~ 23436059 (-)
s100z s100z coding downstream 128856 23409397 ~ 23414490 (-)
aggf1 aggf1 coding downstream 182853 23352028 ~ 23360493 (-)
LOC110523460 NA coding upstream 46968 23590789 ~ 23598535 (-)
LOC110523461 hmdh coding upstream 134461 23678282 ~ 23700703 (-)
LOC110523464 LOC106567795 coding upstream 191100 23729177 ~ 23736929 (-)
LOC110523462 LOC106567435 coding upstream 203573 23747394 ~ 23752091 (-)
LOC110523465 LOC106563023 coding upstream 223801 23767622 ~ 23804521 (-)
G380214 NA non-coding downstream 946 23542113 ~ 23542400 (-)
G380200 NA non-coding downstream 22353 23520466 ~ 23520993 (-)
G380187 NA non-coding downstream 23972 23517588 ~ 23519374 (-)
LOC110522831 LOC106563032 non-coding downstream 52079 23488916 ~ 23556681 (-)
G380223 NA non-coding upstream 11369 23555190 ~ 23600005 (-)
G380679 NA non-coding upstream 209932 23753753 ~ 23754050 (-)
G380680 NA non-coding upstream 210378 23754199 ~ 23754486 (-)
G380682 NA non-coding upstream 212383 23756204 ~ 23756469 (-)
jmy LOC106568093 other downstream 741095 22799696 ~ 22859199 (-)
LOC110523434 LOC106567989 other downstream 1364033 22177265 ~ 22179322 (-)
G378359 NA other downstream 1751353 21791662 ~ 21791993 (-)
G377991 NA other downstream 2513563 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 2838206 20704613 ~ 20705140 (-)
G380610 LOC106567829 other upstream 165977 23709798 ~ 23711891 (-)
G380648 NA other upstream 215218 23759039 ~ 23761807 (-)
LOC110523492 LOC106567536 other upstream 1895200 25437411 ~ 25441794 (-)
G383422 NA other upstream 2452985 25996806 ~ 25998780 (-)

Expression


Co-expression Network