G389031


Basic Information

Item Value
gene id G389031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 30800553 ~ 30801160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU441758
agtgccttgcaaaagtattcggcccccttgaactttgcaaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttattttcagtgaggcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcaccagcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtctgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgcacaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaacttccagctcatacaaggagaagactgatcag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU441758 True 608 lncRNA 0.40 1 30800553 30801160

Neighbor

gene id symbol gene type direction distance location
haus4 LOC106567141 coding downstream 543444 30244530 ~ 30257109 (-)
LOC110523594 LOC106567038 coding downstream 557181 30218103 ~ 30243372 (-)
LOC118964583 NA coding downstream 620935 30177488 ~ 30179618 (-)
LOC110524741 LOC106567126 coding downstream 667016 30109646 ~ 30133537 (-)
surf2 LOC106567032 coding downstream 695865 30102342 ~ 30104688 (-)
LOC110523598 LOC106565912 coding upstream 54382 30855542 ~ 31286199 (-)
LOC110522855 LOC103355419 coding upstream 795898 31597058 ~ 31597647 (-)
LOC110523605 LOC106565751 coding upstream 978105 31779265 ~ 31942907 (-)
LOC110523606 LOC106565750 coding upstream 1285077 32086237 ~ 32151031 (-)
LOC110523607 kad coding upstream 1359013 32160173 ~ 32171800 (-)
G388987 NA non-coding downstream 4599 30732298 ~ 30795954 (-)
G388971 LOC106565929 non-coding downstream 88901 30706825 ~ 30711652 (-)
G388506 NA non-coding downstream 150033 30650300 ~ 30650520 (-)
G388504 NA non-coding downstream 150663 30649683 ~ 30649890 (-)
G388485 NA non-coding downstream 162415 30637929 ~ 30638138 (-)
G389044 NA non-coding upstream 38107 30839267 ~ 30839485 (-)
G389052 NA non-coding upstream 50923 30852083 ~ 30852933 (-)
G389053 NA non-coding upstream 53777 30854937 ~ 30855196 (-)
G389397 NA non-coding upstream 579270 31380430 ~ 31380744 (-)
G387939 LOC106567059 other downstream 588667 30168119 ~ 30211886 (-)
LOC110523591 LOC102784149 other downstream 972245 29821413 ~ 29831150 (-)
G387321 LOC100136012 other downstream 1155805 29603183 ~ 29644748 (-)
G387052 LOC106566935 other downstream 1365242 29434605 ~ 29435311 (-)
G387064 NA other downstream 1405737 29393095 ~ 29394816 (-)
G392227 NA other upstream 2550257 33351417 ~ 33352338 (-)
G392245 NA other upstream 2579632 33380792 ~ 33381565 (-)
G392503 LOC106565394 other upstream 2933002 33734162 ~ 33762381 (-)
G392858 NA other upstream 3346303 34147463 ~ 34148628 (-)
G395297 NA other upstream 5051630 35852790 ~ 35853357 (-)

Expression


Co-expression Network