XLOC_002371 (taar18j)


Basic Information

Item Value
gene id XLOC_002371
gene name taar18j
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40583930 ~ 40584955 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004491
AACAAACTCCTAACAGGAGGAGACTCACTAATGGCCTATGAGACAGAGGATACTCAATACTGCTTTCCTGACATCAACTCATCATGTGTCAAGGGACAACGCACCAGACTTGAATACAATatcatgtatgtgtttgtgtcattgctgtcagcatggactgtgtttctgaatctgctggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACCTGCTTATTCTCTCTCTGGCTGTGGCTGATTTGCTAGTTGGACTTGTTGTGATACCAATCGAGGGTATCAAACAAATTGAGACATGTTGGTATTTTGGAGACACTTACTGTGGACTTTATGTAATGACCGTTAGGTTGCTACTTTCTACATCtcttattaatttagttttaattgctGTTGATCGCTATATGGCTGTGTGTCATTCCTTACTGTACCCACAAACAATAACCACAACAAAAACTTTAATAAGCATTTTTCTCTGTTGGTTTTGCTGTTCAGTTTACATTATTTCATCTGTAATTAGTAATGGATATTTTGACATGTCAAACAAAACCCTGTGTTTTGGCCAATGTATTGTTCTGATTACTCCTGCTTGGAGATTCATTGATTTGATCTGCTCCTTCCTTTTTCCTTGTACTGTGATCATCACTGCATATTTGAGGATATTTTATGTTGTGCATAAGCAAGTGAAAGTTATAAACTCTCAAATAAATGGTGTAAAATGTGTAATGGAGGTTTCAGTGAAGAGAAAATCTGAGAGTAAAGCTGCTCAGACATTGGGAATCATTGTGACAGCTTATCTGCTTTGCTGGATTCCTTTCTATATTTGTTCTctaacaaaaacaacagcaatcTCAGCCACTACAATGACATTTTTAACATGGACATTTTATATAAACTCGGGTCTGAATCCTATTGTCTATGCTTTATTTTACAGCTGGTTTAAAATATCCGTTAAACACATTGTAACTTTCAGAATATTTCAGCCAGCATCCTCTTTGATGAACATTTTAACAGAG

Function

symbol description
taar18j Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060413-4 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000095748

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004491 True 1026 mRNA 0.37 1 40583930 40584955

Neighbor

gene id symbol gene type direction distance location
XLOC_002370 si:ch211-238p8.18 coding upstream 4567 40578332 ~ 40579363 (+)
XLOC_002369 taar18i coding upstream 14164 40568735 ~ 40569766 (+)
XLOC_002368 taar18h coding upstream 21213 40561692 ~ 40562717 (+)
XLOC_002367 CR396590.5 coding upstream 28799 40554917 ~ 40555131 (+)
XLOC_002366 CR396590.2 coding upstream 32976 40550730 ~ 40550954 (+)
XLOC_002372 taar17a coding downstream 13836 40598791 ~ 40599801 (+)
XLOC_002373 CR396590.8 coding downstream 14980 40599935 ~ 40600502 (+)
XLOC_002374 si:ch211-238p8.24 coding downstream 21129 40606084 ~ 40607106 (+)
XLOC_002375 CR396590.7 coding downstream 22746 40607701 ~ 40608717 (+)
XLOC_002376 CR396590.3 coding downstream 24506 40609461 ~ 40609953 (+)
XLOC_002364 NA non-coding upstream 47404 40535862 ~ 40536526 (+)
XLOC_002361 NA non-coding upstream 302928 40122374 ~ 40281002 (+)
XLOC_002359 NA non-coding upstream 666422 39909138 ~ 39917508 (+)
XLOC_002380 CR396590.1 non-coding downstream 53821 40638776 ~ 40639804 (+)
XLOC_002398 BX001050.2 non-coding downstream 162918 40747873 ~ 40748898 (+)

Expression


Co-expression Network