XLOC_002376 (CR396590.3)


Basic Information

Item Value
gene id XLOC_002376
gene name CR396590.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40609461 ~ 40609953 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004496
TAGAAGATCAGGATACACAATACTGCTTCCCTGCCATCAACTAATCATGTGTCAAGGGAAACGCTCCATACATGAATGgaattttgtgttttgtgtttcatTGCTGTCAGCATGGACTGTGTTTTTGAACCTGCTGGTGATCATTTCCATATCACACTTCAAGCAGATTCACACTTGATTATTGACAAACATGATAATTCTCTCTCTGGCTATAACTGATCAGAATTATTGTGATTCCAATAGAAGCTATTAAAGTAACCCTAAACCCTAACATGGTGGTATTTTGATACATATTAAATGGAGTGGAGTGTTTATAAATACTTGAATCAGCATCTCTTAGTAATGTAGTTTTAATTGCTGTTGATCTTTACCTACAGTAGATGCATGTCACCCTTTACTGTACCTACTAAAAGTAACAACAACTAAACATTTTATGAGCATCTTTGCTGGTTTCTTGTTCTTATTTTCTGCTTCCTTGGCATCAAGATCATAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092750

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004496 True 493 unprocessed_pseudogene 0.35 1 40609461 40609953

Neighbor

gene id symbol gene type direction distance location
XLOC_002375 CR396590.7 coding upstream 744 40607701 ~ 40608717 (+)
XLOC_002374 si:ch211-238p8.24 coding upstream 2355 40606084 ~ 40607106 (+)
XLOC_002373 CR396590.8 coding upstream 8959 40599935 ~ 40600502 (+)
XLOC_002372 taar17a coding upstream 9660 40598791 ~ 40599801 (+)
XLOC_002371 taar18j coding upstream 24506 40583930 ~ 40584955 (+)
XLOC_002377 zgc:172131 coding downstream 13461 40623414 ~ 40628487 (+)
XLOC_002378 taar19n coding downstream 19663 40629616 ~ 40630644 (+)
XLOC_002379 si:ch211-238p8.31 coding downstream 24037 40633990 ~ 40635051 (+)
XLOC_002380 CR396590.1 coding downstream 28823 40638776 ~ 40639804 (+)
XLOC_002381 taar19t coding downstream 32564 40642517 ~ 40643602 (+)
XLOC_002367 CR396590.5 non-coding upstream 54330 40554917 ~ 40555131 (+)
XLOC_002366 CR396590.2 non-coding upstream 58507 40550730 ~ 40550954 (+)
XLOC_002364 NA non-coding upstream 72935 40535862 ~ 40536526 (+)
XLOC_002398 BX001050.2 non-coding downstream 137920 40747873 ~ 40748898 (+)
XLOC_002406 CU571179.1 non-coding downstream 329711 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1229966 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1373044 41982997 ~ 41986283 (+)

Expression


Co-expression Network