XLOC_002414 (BX005006.1)


Basic Information

Item Value
gene id XLOC_002414
gene name BX005006.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 41839919 ~ 41840033 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004540
ATATgcagctagctttctgcaactctcacatgatcgcccactgaagctaagcagggctgcactcggtcagtacctggatgggagaccacatgggaaaactaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109923

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004540 True 115 rRNA 0.53 1 41839919 41840033

Neighbor

gene id symbol gene type direction distance location
XLOC_002413 rnf34b coding upstream 22810 41765616 ~ 41817109 (+)
XLOC_002412 lrrc75bb coding upstream 104416 41668483 ~ 41735503 (+)
XLOC_002411 CABZ01049847.1 coding upstream 230754 41549819 ~ 41609165 (+)
XLOC_002410 prlhr2b coding upstream 579352 41252525 ~ 41260567 (+)
XLOC_002409 adrb3b coding upstream 625251 41199660 ~ 41214668 (+)
XLOC_002415 orai1b coding downstream 74051 41914084 ~ 41921417 (+)
XLOC_002416 tmem120b coding downstream 99930 41939963 ~ 41959934 (+)
XLOC_002417 NA coding downstream 142964 41982997 ~ 41986283 (+)
XLOC_002418 setd1ba coding downstream 146652 41986685 ~ 42022566 (+)
XLOC_002419 CR925773.1 coding downstream 319438 42159471 ~ 42162806 (+)
XLOC_002406 CU571179.1 non-coding upstream 875107 40939664 ~ 40964812 (+)
XLOC_002398 BX001050.2 non-coding upstream 1091021 40747873 ~ 40748898 (+)
XLOC_002380 CR396590.1 non-coding upstream 1200115 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 1229966 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 1231202 40607701 ~ 40608717 (+)
XLOC_002424 NA non-coding downstream 630583 42470616 ~ 42477259 (+)
XLOC_002429 NA non-coding downstream 880808 42720841 ~ 42723221 (+)
XLOC_002430 NA non-coding downstream 889913 42729946 ~ 42731994 (+)
XLOC_002432 NA non-coding downstream 901052 42741085 ~ 42745580 (+)

Expression


Co-expression Network