XLOC_002412 (lrrc75bb)


Basic Information

Item Value
gene id XLOC_002412
gene name lrrc75bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 41668483 ~ 41735503 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004537
CGCGGGGAAGCCTGTAAAGAACACAAACACAGCCGAGGAGGTGCGCAGGGGCAGGAGAAACACGGAGGAAAGTGACATTTCAATCATTTCGTGCGCTGAATATGAATTTTGCTTGATGTATTTGGTCAGTTAAAGTGCAATTATGAGCGTGAGATTACTAAAGAGATCCTACTTTACGCACGCTTCATGAAACCGCGTTGCTTTATTTGGTACTGAGGCTGAAATAGGAAAGTTGAAACATGGGATCCAAGTTGACCAGGCAGAGTAGTTTGGACAGTCAAGCCAGCTTCTTTCGGAGGGGTCGACAGGATCATGAGGAGAGGAGGACTGGAGGAAGAGGAGACTTTTTATTCAGTTCTCTGATGCTCAGGTCCGACAAGCTGCCCGGGGTGCTGCGCAGATCCAGCCCGTGTCCGTATGTGCGGAGGGTGGCTTGGGTTCGGGAGATCCAGACCCTGCTGAAGGAGCAGAAGCTGGAGCAAGCCATCGATGTGTTGAAACTGCTTAGAAAGGACCTGGGTCTTGAAGGAACGTCCCTCAACGATATTCTCTACAAAAACGCCGCCTTCCTTAATCTTGTGGATCCAATTTCTCATGAGCTTTTGCTCAATTTGGCCAGAGATTTGCAATGTCCCAAGAGGGAGGCTGATGCTCTGAAGTCCTCAGAGAAGATCTGCAGGCAGCTGATTTATCACCTCACTCCTCACTCCAAGTGGAGCAGACAGAACGTGCCCAGGAGGAAAACTCAAGCCTGtCTGAAGACTACACTGAAAAAGAAACTAGCAAATGATACCGTGGATCTGTCTGGGATTCCTCTCTCTGGCCGTGATTTGCATCGGGTGGCCTACTACCTTCAGAACAACGGCTCATCTGTGACAGCGGTGGACATCAGCTTTACAGAACTGCACGATGAGAGCTTGCGGCTTCTTTTGCCATACTTAGGAGTGCTACCGAAACTCTCCACGCTTGCCATCAATGGTAACCGGCTGACGGTTGCTATCCTTAAAGACCTAATAGAGGTGGTCAAGGACCCTCAAAAGTTTCCCTGTTTGGCTTGGGTGGACTTGGGCAACAATGTGGACATCTTTACCGTGCCCCAGCCGTTGCTGGTTGCCCTGCGCAGACGCTTTGGGATGAGAAGCAGCCTGCCTACTATCTACGAATACAGCGAGGGCCAGGGCAGCAGCTACTGCCTAGAGACGTCTGTTGAGGAAATCAGTGTGtttgaggaggaagaggaggacgaAGAGGATGAACTAGAAGACCATCTGGTGCTGGAAGCCTGGAGTGTAGAAGAGAAAAATACTTTACATTTCTGTGAGAGGTGA

Function

symbol description
lrrc75bb Orthologous to human LRRC75B (leucine rich repeat containing 75B).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-110721-3 Orthologous to human LRRC75B (leucine rich repeat containing 75B).

Ensembl:

ensembl_id ENSDARG00000091128

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004537 True 1328 mRNA 0.50 4 41668483 41735503

Neighbor

gene id symbol gene type direction distance location
XLOC_002411 CABZ01049847.1 coding upstream 59318 41549819 ~ 41609165 (+)
XLOC_002410 prlhr2b coding upstream 407916 41252525 ~ 41260567 (+)
XLOC_002409 adrb3b coding upstream 453815 41199660 ~ 41214668 (+)
XLOC_002408 anxa4 coding upstream 475602 41159241 ~ 41192881 (+)
XLOC_002407 antxr1b coding upstream 621708 40973524 ~ 41046775 (+)
XLOC_002413 rnf34b coding downstream 30113 41765616 ~ 41817109 (+)
XLOC_002414 BX005006.1 coding downstream 104416 41839919 ~ 41840033 (+)
XLOC_002415 orai1b coding downstream 178581 41914084 ~ 41921417 (+)
XLOC_002416 tmem120b coding downstream 204460 41939963 ~ 41959934 (+)
XLOC_002417 NA coding downstream 247494 41982997 ~ 41986283 (+)
XLOC_002406 CU571179.1 non-coding upstream 703671 40939664 ~ 40964812 (+)
XLOC_002398 BX001050.2 non-coding upstream 919585 40747873 ~ 40748898 (+)
XLOC_002380 CR396590.1 non-coding upstream 1028679 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 1058530 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 1059766 40607701 ~ 40608717 (+)
XLOC_002424 NA non-coding downstream 735113 42470616 ~ 42477259 (+)
XLOC_002429 NA non-coding downstream 985338 42720841 ~ 42723221 (+)
XLOC_002430 NA non-coding downstream 994443 42729946 ~ 42731994 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000158_00540221_00575509 NA coding CI01000158 null 540221 ~ 575631 (+)