XLOC_002381 (taar19t)


Basic Information

Item Value
gene id XLOC_002381
gene name taar19t
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40642517 ~ 40643602 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004502
ATGAGTGATGCAGACACTGTATATATAAAAGGACAGAAaggagagcagaacaaactcctaACAGGAGGAGACTCACTCATGGCCTACGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTGACATCAACTCATCATGTGTCAAAGAAAAACGCTCCATTCAGGAATATAATatcatgtatgtgtttttttcactgctgtcagcatggactgtgtttctgaacctgctggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTCTCTGGCTGTAAATGATCTGCTTATTGGACTTATTTTGATGCCTGTAGAGGCCATCAGGCTGATTGAGACGTGTTGGTACTTTGGAGAAACTTTCTGTGTtctgtatttaatattaattggaCTTATTTTCTCAGCAACTCTTAGTTGTTTAGTTTTAATTGCTGTTGATCGTTATGTGGCTGTGTGTCACCCTTTACTGTATCCACAGAAAATAACCATCACTAACATGTTAATGAGTATCTGTCTGAGCTGGGTTTGCTACTCTGCTTATAACACTGCCTTTGCATTTAATAATGGATATTTAAACTCTTCACACAGAAGAGACGTGTGTTATGGACAGTGCTTCATCATGATGACTTTTAGTTGGACAGTCACTGATTTGtccatgtgttttatttttccctgtgtcatAATGATAACTTTATATTCAAGGATCTTCTATGTTGTTCATCAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGGTGGTAAATGTGAAACGGAGGGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTCTGTTTATCTGCTTTGCTatatcccatactatatctgtactttactTGTAAGCTCCTCCACAACTATAACTGTTTTGATGTGGACTGTTCATGCTAATTCAGGTCTGAATCCTCTGGTTTACGCTATATTTTACCCCTGGTTTAAAaagacagctaaactcatcttgACTTTGAAAATATTTCAGCCGGCGTCCTCTCTGATCAATATATTTACAGAAAATGAACTGTAA

Function

symbol description
taar19t Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091116-22 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000115614

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004502 True 1086 mRNA 0.38 1 40642517 40643602

Neighbor

gene id symbol gene type direction distance location
XLOC_002380 CR396590.1 coding upstream 2713 40638776 ~ 40639804 (+)
XLOC_002379 si:ch211-238p8.31 coding upstream 7466 40633990 ~ 40635051 (+)
XLOC_002378 taar19n coding upstream 11873 40629616 ~ 40630644 (+)
XLOC_002377 zgc:172131 coding upstream 14030 40623414 ~ 40628487 (+)
XLOC_002376 CR396590.3 coding upstream 32564 40609461 ~ 40609953 (+)
XLOC_002382 taar19s coding downstream 3162 40646764 ~ 40647825 (+)
XLOC_002383 si:ch211-238p8.35 coding downstream 8797 40652399 ~ 40653442 (+)
XLOC_002384 si:ch211-238p8.35 coding downstream 14347 40657949 ~ 40658992 (+)
XLOC_002385 taar19l coding downstream 17170 40660772 ~ 40661767 (+)
XLOC_002386 taar19u coding downstream 21580 40665182 ~ 40666204 (+)
XLOC_002375 CR396590.7 non-coding upstream 33800 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 42015 40599935 ~ 40600502 (+)
XLOC_002367 CR396590.5 non-coding upstream 87386 40554917 ~ 40555131 (+)
XLOC_002398 BX001050.2 non-coding downstream 104271 40747873 ~ 40748898 (+)
XLOC_002406 CU571179.1 non-coding downstream 296062 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1196317 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1339395 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1827014 42470616 ~ 42477259 (+)

Expression


Co-expression Network