XLOC_002382 (taar19s)


Basic Information

Item Value
gene id XLOC_002382
gene name taar19s
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40646764 ~ 40647825 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004503
ATGAGAGGACAGAAaggagagcagaacaaactcctaACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTAACATCAACTCATCATGTGTCAAAGGGAGACGCTATAGACATGAATATATCATCATGTATGTGTTCTTTTCACTGCTGTCAGCATGGACTGTGTTTCTGAACCTGCtggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTTTCTGGCTGTAAATGATCTGCTTATTGGACTTATTGTGTTGCCTGTGGAGGCCATCAGGCTGATTGAGAGGTGTTGGTACTTTGGAGAAACCTTTTGTTTtctgtatttaatattaattgtgCTTATTTTCTCTGCATCTCTcagttatttagttttaattgctGTTGATCGTTATGTGGCTGTGTGTCACCCTTTACTGTACCCACAGAAAATAACCATCACTAACATGTTAAAGAGCATCTGTCTGAGTTGGGTTTGCTACTCAGCTTATAACATCGCCTTTGTAATTAATAATAGAAACTTAAACTCTTCACAAAAAACAGATGTGTGTTATGGACAGTGTTTAATCATGATGAGTTTTAGCTGGACAGTCATTGATTtgtcaatttgttttatttttccctgtCTCATAATGATCACTTTATATTTGAGGATTTTCTATGTTGTTCATCAGCAAGTGAAGGTTATAAACTCTCTGATGAAGGGTGGTAAATGTGAAACGGAGGGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGTCTGTTTATCTGCTTTGCTatatcccatactatatctgtactttactTGTAAGCTCCTCCACAactataaatgttttaatgtggAATGTGCATGCTAACTCAGGTCTGAATCCTCTGGTTTACGCTATATTTTACCCCTGGTTTAAAaagacagctaaactcatcttgACTTTGAAAATATTTCAGCCGGCATCCTCActgataaatatatttacagaaaATGAATTGTAA

Function

symbol description
taar19s Predicted to enable G protein-coupled serotonin receptor activity; neurotransmitter receptor activity; and serotonin binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; adenylate cyclase-inhibiting serotonin receptor signaling pathway; and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007187 G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger biological_process
GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0007165 signal transduction biological_process
GO:0030425 dendrite cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0030594 neurotransmitter receptor activity molecular_function
GO:0004993 G protein-coupled serotonin receptor activity molecular_function
GO:0051378 serotonin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060413-14 Predicted to enable G protein-coupled serotonin receptor activity; neurotransmitter receptor activity; and serotonin binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; adenylate cyclase-inhibiting serotonin receptor signaling pathway; and chemical synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000116838

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004503 True 1062 mRNA 0.38 1 40646764 40647825

Neighbor

gene id symbol gene type direction distance location
XLOC_002381 taar19t coding upstream 3162 40642517 ~ 40643602 (+)
XLOC_002380 CR396590.1 coding upstream 6960 40638776 ~ 40639804 (+)
XLOC_002379 si:ch211-238p8.31 coding upstream 11713 40633990 ~ 40635051 (+)
XLOC_002378 taar19n coding upstream 16120 40629616 ~ 40630644 (+)
XLOC_002377 zgc:172131 coding upstream 18277 40623414 ~ 40628487 (+)
XLOC_002383 si:ch211-238p8.35 coding downstream 4574 40652399 ~ 40653442 (+)
XLOC_002384 si:ch211-238p8.35 coding downstream 10124 40657949 ~ 40658992 (+)
XLOC_002385 taar19l coding downstream 12947 40660772 ~ 40661767 (+)
XLOC_002386 taar19u coding downstream 17357 40665182 ~ 40666204 (+)
XLOC_002387 taar19p coding downstream 23022 40670847 ~ 40672605 (+)
XLOC_002376 CR396590.3 non-coding upstream 36811 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 38047 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 46262 40599935 ~ 40600502 (+)
XLOC_002367 CR396590.5 non-coding upstream 91633 40554917 ~ 40555131 (+)
XLOC_002398 BX001050.2 non-coding downstream 100048 40747873 ~ 40748898 (+)
XLOC_002406 CU571179.1 non-coding downstream 291839 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1192094 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1335172 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1822791 42470616 ~ 42477259 (+)

Expression


Co-expression Network