XLOC_024323


Basic Information

Item Value
gene id XLOC_024323
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 36376136 ~ 36383338 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049288
ggcTCAGCATCAGCCTGCTACCCCTATTACTACAATTActtctaaaacaacaacaataacaactaaATATCCAGCTATAATTCCAACATCAAAAACTTGTAATTCAAACTGCCACACGCAACTCACCTGCCCATCTTCAACTCAATTCTCCAGCAAGATCACAGTCCAAAACTCGATCACCGCCCACGAACTCAATCCTAACTCTCAAGACGTCAGCCATCCAAGCCTCTGCATGATGCCGAACTCTCACCGCTTTCCTAGCGGTCCATCCGTGATCATGTACACCGCATGCTTCAAGGGGAAACTTCGCCAAAATAACTACTGGAATCTTCAAGCAGGTGTGCTGAAGCAAGATGGAGGTAAACTCAGAAGGACAGCagccctccaggagcgagtttggacacccctgacataATCCATACTCATGTAACGTTACACCATTTGATAACAATGAATCATCCAGTCCGGTATGTCCCAGTCACCGTCTGgctcattctgaagacGAAGTCTAGTGGCTGTTTCTGGACACGGGGAAATACGTCCCGGCAGATCGCATTGGATGTGGCCTGCCAAACCCCCACCCAaccgaaaaaataaataaataatccattCGGTGTTTTCCTCTGGCAAAGAGGATTCCTCCTTTTTCAGGACTTTAACCGGTCCCTGTATCCACTGGAACATGATGGCTGGAAGATGGCAGCATATGGTCCACATGTACCTTCACACTATGTTCTCCGACTTGGACCTCTCACATACCAAGTTTAAGTTTGAACAAGATTACTCCTGGAGTCCAGGCACAATTTGAGTGTCGACTGTTCCACACCTTCACTCTCTGGCCAACCTCAACCTTTCCCATGCTTCATTGAATATTTGTACCACCCGCTCGGCTTGACCATTTGTGACTGGATGATATGGAGGAGATGGCACATGAGACActccgtttattttttttgtaggaaCTCTTCAAACTCCCTGGAAGTGAATGGTGGGATGTTGTTAGACACCAATTCTTTTAGGAAACAATATGAAGCAAGATGTTTATAGTCCCTGCATTTGTCAAGTTGGTGGGGAAGATTTCCACACATTTTGAGTGAGCATCTATAATCAGTAAGAAGTGCTGTTTGTCAATCTCAGCAATCTATGTGAATGCCATCCCAGAGTGCTGTTGCCCAGGACAAGGGGAAAAAGGGAAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049288 True 1197 lncRNA 0.46 4 36376136 36383338

Neighbor

gene id symbol gene type direction distance location
XLOC_024322 zgc:173552 coding upstream 26152 36349574 ~ 36349984 (+)
XLOC_024321 hist1h2a3 coding upstream 27124 36348401 ~ 36349012 (+)
XLOC_024320 si:ch211-113a14.22 coding upstream 28636 36347126 ~ 36347500 (+)
XLOC_024319 hist1h4l coding upstream 29958 36345867 ~ 36346178 (+)
XLOC_024318 zgc:173552 coding upstream 32851 36342875 ~ 36343285 (+)
XLOC_024324 NA coding downstream 15174 36398512 ~ 36404040 (+)
XLOC_024325 ankrd27 coding downstream 21683 36405021 ~ 36437925 (+)
XLOC_024326 NA coding downstream 65246 36448584 ~ 36451721 (+)
XLOC_024327 FO904923.1 coding downstream 73462 36456800 ~ 36456918 (+)
XLOC_024328 CABZ01088576.1 coding downstream 126336 36509674 ~ 36509789 (+)
XLOC_023973 CR762411.1 misc upstream 21158027 15217824 ~ 15218109 (+)
XLOC_024301 NA non-coding upstream 102549 36269642 ~ 36273587 (+)
XLOC_024299 CABZ01089081.1 non-coding upstream 275427 36096364 ~ 36100709 (+)
XLOC_024296 NA non-coding upstream 360700 35988910 ~ 36015436 (+)
XLOC_024297 NA non-coding upstream 360974 36011421 ~ 36015162 (+)
XLOC_024292 BX957352.1 non-coding upstream 494605 35881415 ~ 35881531 (+)
XLOC_024330 NA non-coding downstream 343252 36726590 ~ 36737258 (+)

Expression


Co-expression Network