XLOC_002453 (BX569788.1)


Basic Information

Item Value
gene id XLOC_002453
gene name BX569788.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 44767388 ~ 44769521 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004606
AGACAAATCCTCCACATTGTCACCTCTGTGGTCCAGTAATATCCAACAACAGGTGCAAAAATCTTCCACGTCGTCACGCAGGCTATCAGATCGTCAACAACCGGCAGTGATGACGGACAGATGGTTGCCAAGGGTAACAGCAGGAAGGAGGACTCGGAGACGGTTTTTGAGGCACTTCGAGAAGAGCCATTGGACGTGAGATCTACGGAGCTTCGGTTTGGATTCTCTGGAAGTTCTCCGTCTCCAGTTGGCATCACTGTGGATACTGTGGTTTCCATTCGGCTGGCCCTGAAGATGCTGGCCTGCGTCTGAAGATAGCGAGTAGACTTGAGCTCCAGACCTTCATATGAGCCTTGAGGGACGCACGGACACCAGGAAAACGCCTGCTGGAATCCCGCTCGAAACCTGTACAGGTAGACtacaattataatataaaataacagttGTATTgcattattcagttttttaaaaatcatttgagaaaTTGATTCTGCACCTCCTAAAATTAGCAATTAATAAAGAGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100967

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004606 True 525 lncRNA 0.46 2 44767388 44769521

Neighbor

gene id symbol gene type direction distance location
XLOC_002452 scarb1 coding upstream 19118 44699734 ~ 44748270 (+)
XLOC_002451 ubc coding upstream 72656 44692272 ~ 44694732 (+)
XLOC_002450 tpst2 coding upstream 75444 44677632 ~ 44691944 (+)
XLOC_002449 sez6l coding upstream 94986 44581378 ~ 44672402 (+)
XLOC_002448 denr coding upstream 322674 44437080 ~ 44444714 (+)
XLOC_002454 SLC4A5 coding downstream 42179 44811700 ~ 44901444 (+)
XLOC_002455 zgc:114173 coding downstream 134155 44903676 ~ 44914922 (+)
XLOC_002456 BX569788.2 coding downstream 138247 44907768 ~ 44907883 (+)
XLOC_002457 NA coding downstream 144086 44913607 ~ 44917399 (+)
XLOC_002458 sec14l7 coding downstream 155163 44924684 ~ 44939658 (+)
XLOC_002447 NA non-coding upstream 383929 44380982 ~ 44383459 (+)
XLOC_002445 NA non-coding upstream 569177 44055749 ~ 44198211 (+)
XLOC_002442 CR384089.1 non-coding upstream 742737 43993352 ~ 44024651 (+)
XLOC_002441 NA non-coding upstream 829100 43828327 ~ 43938288 (+)
XLOC_002439 NA non-coding upstream 1242175 43518594 ~ 43525213 (+)
XLOC_002465 NA non-coding downstream 371423 45140944 ~ 45145137 (+)
XLOC_002467 CT956056.1 non-coding downstream 468435 45237956 ~ 45238042 (+)
XLOC_002470 NA non-coding downstream 586182 45355703 ~ 45356324 (+)

Expression


Co-expression Network