XLOC_002442 (CR384089.1)


Basic Information

Item Value
gene id XLOC_002442
gene name CR384089.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 43993352 ~ 44024651 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004582
GTAACGTTAGTTTCAGCAGGCTTGCTGATCGCATTATAGTTGCTTTTTAGTTATTACATCGTCAAACCAtaaaattattagacattcagGTTAAGAAAACAATTCTGACCAATTTTAGGAAATAAAATGAGGGAAACAATGTAAAGCTATCTTATATTATTATAAGTACCAGTCTGCTTCGACTGTGAGGTGAAACAAACATAGATAAAATCCGGTGACTTACGGGCCGCACTCAACAATGATACTGCGGACTCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094692

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004582 True 255 lncRNA 0.36 2 43993352 44024651

Neighbor

gene id symbol gene type direction distance location
XLOC_002441 NA coding upstream 55064 43828327 ~ 43938288 (+)
XLOC_002440 nr2f1b coding upstream 185155 43797130 ~ 43808197 (+)
XLOC_002439 NA coding upstream 468139 43518594 ~ 43525213 (+)
XLOC_002438 rasa1b coding upstream 542764 43406796 ~ 43450588 (+)
XLOC_002437 vcanb coding upstream 729467 43188678 ~ 43263885 (+)
XLOC_002444 cryba4 coding downstream 17382 44042033 ~ 44051808 (+)
XLOC_002445 NA coding downstream 31098 44055749 ~ 44198211 (+)
XLOC_002446 kmt5aa coding downstream 338544 44363195 ~ 44378081 (+)
XLOC_002447 NA coding downstream 356331 44380982 ~ 44383459 (+)
XLOC_002448 denr coding downstream 412429 44437080 ~ 44444714 (+)
XLOC_002433 NA non-coding upstream 1172446 42819726 ~ 42820906 (+)
XLOC_002432 NA non-coding upstream 1247772 42741085 ~ 42745580 (+)
XLOC_002430 NA non-coding upstream 1261358 42729946 ~ 42731994 (+)
XLOC_002453 BX569788.1 non-coding downstream 742737 44767388 ~ 44769521 (+)
XLOC_002456 BX569788.2 non-coding downstream 883117 44907768 ~ 44907883 (+)
XLOC_002457 NA non-coding downstream 888956 44913607 ~ 44917399 (+)

Expression


Co-expression Network