XLOC_002433


Basic Information

Item Value
gene id XLOC_002433
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 42819726 ~ 42820906 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005943
GATTTGCCATTAACAGGTTCAGAAAGAAAATCACATATTTTTCTGTTCATCAATGAAGGATgcctgaataaaagaaaaatgaaaaggtATGAAGAAAAAATGCACAATAGCGCAGCTATTGAGGGGTCACATGTGACACAGGTAATTAAAATCAGGTGTGTTTCTTTCTGTAGGGTcccactctctctctcccacCGCTTACCACCAGCACCTGGGGCTAAAGATAGGCCTCATTCACCGTCAGCTCGAGGAACTGGTCGTCATCAACTCCGGCTCACGGAGAGCGCTTCCCCCAGCCGAAACGGAAAGTGTGCGCTGCGCCGCTCACGGCAGTGGCCCCTGGATGAGTGCGCCTCAGCCAAAGAGCAGGCCAAAGCTCTAATTGACCTGGCCTGCCTTTGGCTGCTTGTAGATCATCTATAAGTTGCCCAGGTAGTCGAAAGGCTTGTGATCCACCGCCTGCTGCAGGCGTTGCCTTACCAGCGACAACATCTGGTAATGCCCGGCGAGGGCATGGAAAGCAGATGGAAAGCTGAAGTTTTGGTTTtgctaataataatgttttggTTTAGTTAACACAGAAATACTGGCATAGATGATACTGAAacattagtttagtttaaactgaAGTTTTGGTTTAGTTAATGCTGAGGTTTTGGTTTAGTTAACACTGAAGTTTAGGTTTAGTTAATACTAAAGTTTTGTTTTAGGTAACTCTCAAGTTCTGGTTTAGTTAATACTAAAGTTTTGGTTAGTCAATACTGATGTTTAGGTTTAGTTAATACTAAAGTTTTGGTTTAGTTAATACTGATGTTTAGGTTTAGTTAATACTACCGTTTTGGTTTAGGTTACACTGAAGTTCTGGTTTAGTTAATGATGTTTAGGTTTAATTAATACTAAAGTTTTGGTTAAGCTAATACTGATGTTTAGGTTTAGTTAATACTAACGTTTTGGTTTAGGTTACACTGAAGTTCTGGTTTAGTTAATAATGATGTTTAGGTTTAGGTAATACTAAAGTTTTGGTTTAGTTAATACTGATGTTTAGGTTTAGTTAATACTAACGTTTTGGTTTATGTAACACTGAAGTTCTGGTTTGGGTAATACTAAAGTTTTGGTTAAGTCAATGCTGAGATTTTGGCTTTGTTgaagttattaataaaattttgGACACAGAAACATTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005943 True 1181 lncRNA 0.39 1 42819726 42820906

Neighbor

gene id symbol gene type direction distance location
XLOC_002432 NA coding upstream 74146 42741085 ~ 42745580 (+)
XLOC_002431 CABZ01063556.1 coding upstream 79064 42733210 ~ 42740662 (+)
XLOC_002430 NA coding upstream 87732 42729946 ~ 42731994 (+)
XLOC_002429 NA coding upstream 96505 42720841 ~ 42723221 (+)
XLOC_002428 rhobtb2b coding upstream 102987 42678520 ~ 42716739 (+)
XLOC_002434 zcchc9 coding downstream 77197 42898103 ~ 42903716 (+)
XLOC_002435 atg10 coding downstream 216158 43037064 ~ 43076207 (+)
XLOC_002436 xrcc4 coding downstream 267364 43088270 ~ 43184354 (+)
XLOC_002437 vcanb coding downstream 367772 43188678 ~ 43263885 (+)
XLOC_002438 rasa1b coding downstream 585890 43406796 ~ 43450588 (+)
XLOC_002424 NA non-coding upstream 342467 42470616 ~ 42477259 (+)
XLOC_002417 NA non-coding upstream 833443 41982997 ~ 41986283 (+)
XLOC_002439 NA non-coding downstream 697688 43518594 ~ 43525213 (+)
XLOC_002441 NA non-coding downstream 1007421 43828327 ~ 43938288 (+)
XLOC_002442 CR384089.1 non-coding downstream 1172446 43993352 ~ 44024651 (+)
XLOC_002445 NA non-coding downstream 1234843 44055749 ~ 44198211 (+)
XLOC_002447 NA non-coding downstream 1560076 44380982 ~ 44383459 (+)

Expression


Co-expression Network