XLOC_002437 (vcanb)


Basic Information

Item Value
gene id XLOC_002437
gene name vcanb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 43188678 ~ 43263885 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004574
GAAAAACTAAAAGATCAGGAACTGGAAAAATaaGTTTGAGATGATGTTGTTGGACGTGAAGCACATCCTCTGGCTGATCTGTGTCTGCAGCGCCTACTCGCAGGATGACTCTGTTCGCCGGATGCGGGTGGTTCGGAGCTCTTCCCGGGTCCACGGCGCTCTAGCGCAGTCTGTTGTTTTACCGTGTCGTTTTCTGGTGCTGCCGCCGCTACCGGGCTCCTCCGTCATAACTCACTCTGATCACCTGCGCATCAAGTGGACCAAACTCCAGAGCCATGGGGAAGCCGTCGCTGTGGTGGCCCAGAACGGCATCATCAAAATGGGCCAAGAGTATATGGGCCGGGTGTCAGTGCCCAGCCGACCGGAAGACCAAGGGGACGCTTCTCTGACCATCTCCAGACTCAGGGCCAGTGACGCCGGGGTGTATCGCTGCGAGGTCATGCACGGCATTGAGGACACTCAGGACTCCATTACTCTGGATGTCAGTGGTGTTGTGTTTCATTACCGGGCGAACACCAGCCGCTACAGTCTGAACTTCACACAAGCTCAGCAGGCGTGTGCAGATGTGGACTCCAGCATCGCCACCCCTGAACAGCTTTATTCAGCATACGAGGACGGATTCGAGCAGTGTGACGCCGGATGGATGGCCGACCAAACCGTCAGATATCCCATCATTAGGCCACGTGACGGTTGTCATGGTGATAAGTGGATGAAGCCGGGGGTCAAATCATACGATGTCAGGAACGCCTATGAGAAGTATGACGTTTACTGCTATGTGGGAAAACTACAAGgtgagGTGTTCTTCATTGATCAGAAACTGTCTCTGGACGAGGCCCGCTCGGCGTGTGTGGGTCAGGACTCAGTGTTGGCGTCTCCTGGTCATCTTCATGCCGCCTGGAGAGACGGCATGGACCAATGCGATTTCGGCTGGTTGTCGGATGGCAGCGCTCGATACCCGGTCTCCGTTCCCAGACTGCAGTGCGGCCGAGGACAACTGGGCGTCAGGACCATGTACCGCAACGCCGACCGGACGGGCTACCCTTTACCCACAATGAAACTAGGAGCCTACTGTTTCAGAGGACGGGATCCTACAACTGCACCCACAGCTGGACCCACAACACCTACAGTTCCCTGGGACGCCCTTAAGATTTCCTCCCTGGAAGTAATGTCTTCTGCGCCAACCGATGACACCATAGAAGAACCACCTTCAATGTTCTCTGCAAGCATGGCACCACGTGACAAACCCACTCCTGAAGCATATCCCACAATTGTTACAACTCAAACTGGAGGGATTTTGGATACACCTTCCCCAACATTTGGTGACTATGATGATAATAGCAACTTAATGGTGCAAGGGGCACCTGACCTTTCACTCCAGGGTACCGTGGGCTCCACCACAATGGTAACCCCATCTTATTACGACTCTATTTTCTCTATCAAACTTCCTCCTCAACCCACAAAAGGGGTCAAGAATCCTTTGGATACACCTCATGGGGAATACAGTAGTGCTGAGGGAAGCATCAGCGGAGACACGGAGACTCCGGAGAGTGTGATTCCTACTTCACCTGTGCTTGTCACAACTCTCCAAGTAGACCCAGACCAACCAAAAGTGGTGTACAAAGAGGACGGAAGCACAGAAAACATCACTGAAGGAGTGGTCTTTGCTGAGTCCAGTATGGGAACCCCAGGCTTAGGTGAAGTGATTGTGCATGGGTCACAGTCTGAAGTCTCCAAGAATGTCAGCTTTCCGATAGACATCAGCTTGCTCATAGTCGACATCAAGGATACAAATCAATCAGTTGAAAGTGTTCTGGATTTTCTTGGAGAACCACGGGGCATCACCGATGTTCTAACATCTAGTGAAAATGAGCCACCTTTGGGCAGTGGAGACCTTGAAATATATCCTTCAGCTTCTGTTACCGTCACCCCAGAAGTGAGTTTCATTAACGGGAAGCACGAGTTGACTCTGCAACCAGTCGCCGAACAGGAGGCTAGAGGAGACCAGTTCGACACTGTGACCCCTCCAATTGAAGAAATCATCCCTGACGATGAGATAGTAATTCTTATGTCAGAATTTGAAGGTGTTGTATCTTCCCCTAAAACAGATGAATCTGGCTTGACTACGAGAAGTCCAGTTGAGCCCCATTTCACAACAAAAATCTCAAAGCCAGACTTGGGCAGTGGAGATCTTGAAATATATTCTTCAGCTTCTGTTACCGTCACCCCAGAAGTGAGTTTCATTAATGGAAAGCATGAGTTGACCCTGAAACCAGACGTTGAACATGAGGCTAGAGGAGATCAGTTTGACACTGCGACCCCTCCAATGGAAGAAATTATTCCTGATGATGAGGTTGTAATAGTTCTGGCCGAAGCTGAAGGTCTTACATCTTCCTACAAAACGGATGAATCTGGCTTGACTACAAGAAGCCCAGTTGAGCCCTATTTCACAACAAAGATCTCAGAAAGTGCAACCATGAGTGAATTGCCCATATTTTCAACCAAATCTCCAAGCCAGGAGATAACCCCACAAGCCATATCATTTAGCACATCAATCAATGAAGAAAGTTCAGGGATGCGCCCAACAGATGATGAAGAGGAGCTGACTACATTGGAAGGCTCTGCGGATGACCTGCAGTCAGCTACAGCTTCTACTGACCCAGATATGGTGGCTACTGACGAGACTGAAATAGGTGGAACAGAGAAGCCTACACAGGCATATGGGGTGCATTGCTCCACCCAAGGACCAATTACAACTCCAGAAACATCTCAAACTACAGCATCCAGCCCTGTAGAAAAAGAAATAAAGCCGGAAAGAGATGATTTTGAGGGTTCCACCTCAGCAGAAGAAGAGAGCTCTGGACAAGATATGTATTCTCGAGAGGAACCAAAACAACCGATTTTATCTCCAACTCTCTCTGTTCCTTCTCACTCCTTTACAACTTCCTCAACAAGTACTCATCCCAAAGACCCAAGGGAACCTGCTAGTTTACTCTTGCCTAGTGCAGAGCCTGCAGTAAATGTGGTTTCAACTTTACAAACAAGAGTAATCCCAGAGGAGAAAGACCAAAGCAGGAGTACCACTAAGAGTCCTTTATTGGTGCCTGAGTTTGAAAAAGATGTAAGCACAGTCTTCGCCATCTCTGGGGACAGTGGCTCTGGTGATCATCCAACAGAAGCATTAACAAAACAACCTTTCATTGTGACTACCGTTCCTTCTCTTTTCATTCAACAAACTGTTGAAACTAGTGTTGATGCAAATGAACCAACTAAAGCATTTGAAGGTTCTGCTGAAGACACAACGCCATTGTCTTTCACCACTGCCCGAACTGAAACTAAATTCACAACACAAAGATCAGATGCTAGAATTCTGCCCACGGATAGTCTAAGAGCAATAATGTCTTCCTCCCAAGAAACTGTTCTAATCCAAAAAACTCATTCGGAAGAGACAACCACTTTAGTGGTGCCATCAGAGACTACAGAAGAGACGATGTTACCTTCTAAATTTGGATTCTCAACAGAGGAGCCTCTCATCTCAACGTCTGTACATTCCAGTGGCCCCATCACTATTGCTGATACAAATTTAAGCATTTCAGAGTCAGTCCAGGATATTACAAGTACTTCTTCTACAACAGAAGACATGATCACCACCCCTAAAGCCACAAGTACTTCGTCATTTGAAGAGACTGTTGTAGATTATGAAGATATGCAGGGTGCCTCAGTTGTTGAAAGACAACCACCAATCAGGGAAGAGTTCACCACAAAAAAGCCAGAGGTCTGGACTGATTCCAGCTACACTGTGGAGAGCCATGTGGTGGATTTGCAAGATCACGCACTTTGCTCGGTCAGTGTGTGTGAAAACGGCGGAACATgcttctccagcagaaaaggaaaTGTTTGTGTCTGCATGCCTGGATTTAGTGGGGAACGCTGTGAAAACGATGTCGATGAATGCCAGTCGAATCCTTGCCGCAATGGTGCTACATGCATTGATGGAATGAACTCTTTCAAATGTGTCTGTCTGCCCAGCTATTCAGGATCCCTCTGTGAACAAGATACGGAGGTGTGCGACTTTGGTTGGCAGAAGTTTCAGAGCCACTGCTATAAGTACTTCACCCACCGGCGGACATGGGAGGCAGCAGAAAGAGAGTGTCGTCTGCAGGGCGGACACCTGACCAGCGTCCTGTCCCACGAGGAGCAGCTCTTCGTAAATCGTTTGGGTCATGACTATCAGTGGATCGGCCTGAATGATAAAATGTTTGACAATGATTTCCGCTGGACTGATGGACATCCTATGCAATTCGAGAACTGGCGTGATGGTCAGCCGGACAGCTTCTTCTCCACCGGTGAGGACTGTGTGGTCATGATCTGGCATGAGAGCGGACAGTGGAACGATGTGCCCTGCAACTACCACCTGACCTTCACCTGTAAGAAGGGCACAGTGTCCTGCGGTCAGCCTCCTCTCATAAAGGACGCTCAAGTCTATGGCAGCATGAAGCCGCGATACGAGATCAACTCTCTGGTTCGATATCACTGTAAAGAAGGCTTCATCCAGAGACATGTCCCTACTATCAGATGCAGAGAAGACGGACAGTGGGACAAGCCCAAAATCACATGCTTGAATCCGTCCACCTTCCAGAAGATGTATGCACACAAATACCAAAACAACAACTATTACAACAGCAGTAAGAGACGCTTCAGTGAATCTCAGTACCGCCATCGCTGGTCAAAAACAGCAGAAGAACTCAAACACTGATCTGCATCCAGATCTACTTCACGTCTATCTTTCAAGACAAAACATGTGCCTGATGAATGTTTTATAGAGCCGCAAAGTGAATTTCCCTGAGGgactgcaagaaaaaaaataatcataacaataaaaaaccACCACACAGAGCCACTGAGAGTGTACTTTGACTATGCAAATGAATACATTGCATTTAATAATACTGTCTTAATGTTTGGATGTTGGAATAGGGGGCGGGGCTTAAATGTATATAGTAGAAATGAGGATCAAGTCAACGCAGCTGTGAATTGGTGACTGTATTCATCCGTAAGTTTTGCTTGCGAAGAACTGGATTTCCTTTTCTCTCCGGCTCTTTAAGAGAGCACTATGGTACGAGCAGTTTACTGATAAAAGGACAATAggctttatatgtttgttttgaaTTGTGGCGAAGGGGTTTGAATGGGAGGTCACGAGTCCAGAGGACAAACAATGCTCAAAGACTGCAACTCATGACTGGAAAACAAATCTCCACCGTCATCATCATCTTCAGAGAACGCCATTGTACACTCTCACAATCATATGCTCATcaaaatatatctatattttttctgtgtgcattttgttttaaaacatgtgggGTTGTAATATAACcaatttgtttgttcttttaatGAATGTCATGGTaaagaatgaatatatgaatactGTATGTGTGGTATATGTGAATGAACTAGCATTTTTCTTTTGTCAAGCATTATTACAAATGTTATAAGCCACAGAAGTTTAATTTATTGCTGAAGATACATATAACGATGAATGAACTGTGAGATTTTGAATAATAAAGCGCTATTAGAATATTA
>TCONS_00004575
ATCACTTTCATGCTGCTGTTGGGAGTGTGATTTATCAGTGCATTGCTTCAGATGAGCTGTCGGGCTGTTGCGAATGTTGATCATTATTAATATAGACTGATGATGATTGCTAGAGAGCGGAGCGCGATGCTGTATAATATATCGCTGTCTACTGTAGTGTTTAAGGAGTGTGTGCGCTATTAAGGGCGTGTGTGGTTCAGTTAGACTGTCATTGGTTTTAGTCACCACATAAACATCTTATATTATAGTATAACTGTCCTTATGCACGCGTTTGTAGCGCTGTATATCTGTAAATGGAGCTGTAGCAGACGCGGGTTCTGATGGCAGTGTCATTTTGATAAAGGAGACATGGAAACAAGCAGTGAGTGTGTAGACCTCGCTGGAGCTGGAACAAAGACACAAGCAGACATGAACAGAAAGAGTTTGACAACCAAGCCTCGTTTGAGTAAACTGTAACTGTGGCTGCAGATGTTTGGAGCTGAGCTTCACCAAATGAAAAGCTGTATTTGTTTGCAGGTTTGAGATGATGTTGTTGGACGTGAAGCACATCCTCTGGCTGATCTGTGTCTGCAGCGCCTACTCGCAGGATGACTCTGTTCGCCGGATGCGGGTGGTTCGGAGCTCTTCCCGGGTCCACGGCGCTCTAGCGCAGTCTGTTGTTTTACCGTGTCGTTTTCTGGTGCTGCCGCCGCTACCGGGCTCCTCCGTCATAACTCACTCTGATCACCTGCGCATCAAGTGGACCAAACTCCAGAGCCATGGGGAAGCCGTCGCTGTGGTGGCCCAGAACGGCATCATCAAAATGGGCCAAGAGTATATGGGCCGGGTGTCAGTGCCCAGCCGACCGGAAGACCAAGGGGACGCTTCTCTGACCATCTCCAGACTCAGGGCCAGTGACGCCGGGGTGTATCGCTGCGAGGTCATGCACGGCATTGAGGACACTCAGGACTCCATTACTCTGGATGTCAGTGGTGTTGTGTTTCATTACCGGGCGAACACCAGCCGCTACAGTCTGAACTTCACACAAGCTCAGCAGGCGTGTGCAGATGTGGACTCCAGCATCGCCACCCCTGAACAGCTTTATTCAGCATACGAGGACGGATTCGAGCAGTGTGACGCCGGATGGATGGCCGACCAAACCGTCAGATATCCCATCATTAGGCCACGTGACGGTTGTCATGGTGATAAGTGGATGAAGCCGGGGGTCAAATCATACGATGTCAGGAACGCCTATGAGAAGTATGACGTTTACTGCTATGTGGGAAAACTACAAGgtgagGTGTTCTTCATTGATCAGAAACTGTCTCTGGACGAGGCCCGCTCGGCGTGTGTGGGTCAGGACTCAGTGTTGGCGTCTCCTGGTCATCTTCATGCCGCCTGGAGAGACGGCATGGACCAATGCGATTTCGGCTGGTTGTCGGATGGCAGCGCTCGATACCCGGTCTCCGTTCCCAGACTGCAGTGCGGCCGAGGACAACTGGGCGTCAGGACCATGTACCGCAACGCCGACCGGACGGGCTACCCTTTACCCACAATGAAACTAGGAGCCTACTGTTTCAGAGGACGGGATCCTACAACTGCACCCACAGCTGGACCCACAACACCTACAGTTCCCTGGGACGCCCTTAAGATTTCCTCCCTGGAAGTAATGTCTTCTGCGCCAACCGATGACACCATAGAAGAACCACCTTCAATGTTCTCTGCAAGCATGGCACCACGTGACAAACCCACTCCTGAAGCATATCCCACAATTGTTACAACTCAAACTGGAGGGATTTTGGATACACCTTCCCCAACATTTGGTGACTATGATGATAATAGCAACTTAATGGTGCAAGGGGCACCTGACCTTTCACTCCAGGGTACCGTGGGCTCCACCACAATGGTAACCCCATCTTATTACGACTCTATTTTCTCTATCAAACTTCCTCCTCAACCCACAAAAGGGGTCAAGAATCCTTTGGATACACCTCATGGGGAATACAGTAGTGCTGAGGGAAGCATCAGCGGAGACACGGAGACTCCGGAGAGTGTGATTCCTACTTCACCTGTGCTTGTCACAACTCTCCAAGTAGACCCAGACCAACCAAAAGTGGTGTACAAAGAGGACGGAAGCACAGAAAACATCACTGAAGGAGTGGTCTTTGCTGAGTCCAGTATGGGAACCCCAGGCTTAGGTGAAGTGATTGTGCATGGGTCACAGTCTGAAGTCTCCAAGAATGTCAGCTTTCCGATAGACATCAGCTTGCTCATAGTCGACATCAAGGATACAAATCAATCAGTTGAAAGTGTTCTGGATTTTCTTGGAGAACCACGGGGCATCACCGATGTTCTAACATCTAGTGAAAATGAGCCACCTTTGGGCAGTGGAGACCTTGAAATATATCCTTCAGCTTCTGTTACCGTCACCCCAGAAGTGAGTTTCATTAACGGGAAGCACGAGTTGACTCTGCAACCAGTCGCCGAACAGGAGGCTAGAGGAGACCAGTTCGACACTGTGACCCCTCCAATTGAAGAAATCATCCCTGACGATGAGATAGTAATTCTTATGTCAGAATTTGAAGGTGTTGTATCTTCCCCTAAAACAGATGAATCTGGCTTGACTACGAGAAGTCCAGTTGAGCCCCATTTCACAACAAAAATCTCAAAGCCAGACTTGGGCAGTGGAGATCTTGAAATATATTCTTCAGCTTCTGTTACCGTCACCCCAGAAGTGAGTTTCATTAATGGAAAGCATGAGTTGACCCTGAAACCAGACGTTGAACATGAGGCTAGAGGAGATCAGTTTGACACTGCGACCCCTCCAATGGAAGAAATTATTCCTGATGATGAGGTTGTAATAGTTCTGGCCGAAGCTGAAGGTCTTACATCTTCCTACAAAACGGATGAATCTGGCTTGACTACAAGAAGCCCAGTTGAGCCCTATTTCACAACAAAGATCTCAGAAAGTGCAACCATGAGTGAATTGCCCATATTTTCAACCAAATCTCCAAGCCAGGAGATAACCCCACAAGCCATATCATTTAGCACATCAATCAATGAAGAAAGTTCAGGGATGCGCCCAACAGATGATGAAGAGGAGCTGACTACATTGGAAGGCTCTGCGGATGACCTGCAGTCAGCTACAGCTTCTACTGACCCAGATATGGTGGCTACTGACGAGACTGAAATAGGTGGAACAGAGAAGCCTACACAGGCATATGGGGTGCATTGCTCCACCCAAGGACCAATTACAACTCCAGAAACATCTCAAACTACAGCATCCAGCCCTGTAGAAAAAGAAATAAAGCCGGAAAGAGATGATTTTGAGGGTTCCACCTCAGCAGAAGAAGAGAGCTCTGGACAAGATATGTATTCTCGAGAGGAACCAAAACAACCGATTTTATCTCCAACTCTCTCTGTTCCTTCTCACTCCTTTACAACTTCCTCAACAAGTACTCATCCCAAAGACCCAAGGGAACCTGCTAGTTTACTCTTGCCTAGTGCAGAGCCTGCAGTAAATGTGGTTTCAACTTTACAAACAAGAGTAATCCCAGAGGAGAAAGACCAAAGCAGGAGTACCACTAAGAGTCCTTTATTGGTGCCTGAGTTTGAAAAAGATGTAAGCACAGTCTTCGCCATCTCTGGGGACAGTGGCTCTGGTGATCATCCAACAGAAGCATTAACAAAACAACCTTTCATTGTGACTACCGTTCCTTCTCTTTTCATTCAACAAACTGTTGAAACTAGTGTTGATGCAAATGAACCAACTAAAGCATTTGAAGGTTCTGCTGAAGACACAACGCCATTGTCTTTCACCACTGCCCGAACTGAAACTAAATTCACAACACAAAGATCAGATGCTAGAATTCTGCCCACGGATAGTCTAAGAGCAATAATGTCTTCCTCCCAAGAAACTGTTCTAATCCAAAAAACTCATTCGGAAGAGACAACCACTTTAGTGGTGCCATCAGAGACTACAGAAGAGACGATGTTACCTTCTAAATTTGGATTCTCAACAGAGGAGCCTCTCATCTCAACGTCTGTACATTCCAGTGGCCCCATCACTATTGCTGATACAAATTTAAGCATTTCAGAGTCAGTCCAGGATATTACAAGTACTTCTTCTACAACAGAAGACATGATCACCACCCCTAAAGCCACAAGTACTTCGTCATTTGAAGAGACTGTTGTAGATTATGAAGATATGCAGGGTGCCTCAGTTGTTGAAAGACAACCACCAATCAGGGAAGAGTTCACCACAAAAAAGCCAGAGGTCTGGACTGATTCCAGCTACACTGTGGAGAGCCATGTGGTGGATTTGCAAGATCACGCACTTTGCTCGGTCAGTGTGTGTGAAAACGGCGGAACATgcttctccagcagaaaaggaaaTGTTTGTGTCTGCATGCCTGGATTTAGTGGGGAACGCTGTGAAAACGATGTCGATGAATGCCAGTCGAATCCTTGCCGCAATGGTGCTACATGCATTGATGGAATGAACTCTTTCAAATGTGTCTGTCTGCCCAGCTATTCAGGATCCCTCTGTGAACAAGATACGGAGGTGTGCGACTTTGGTTGGCAGAAGTTTCAGAGCCACTGCTATAAGTACTTCACCCACCGGCGGACATGGGAGGCAGCAGAAAGAGAGTGTCGTCTGCAGGGCGGACACCTGACCAGCGTCCTGTCCCACGAGGAGCAGCTCTTCGTAAATCGTTTGGGTCATGACTATCAGTGGATCGGCCTGAATGATAAAATGTTTGACAATGATTTCCGCTGGACTGATGGACATCCTATGCAATTCGAGAACTGGCGTGATGGTCAGCCGGACAGCTTCTTCTCCACCGGTGAGGACTGTGTGGTCATGATCTGGCATGAGAGCGGACAGTGGAACGATGTGCCCTGCAACTACCACCTGACCTTCACCTGTAAGAAGGGCACAGTGTCCTGCGGTCAGCCTCCTCTCATAAAGGACGCTCAAGTCTATGGCAGCATGAAGCCGCGATACGAGATCAACTCTCTGGTTCGATATCACTGTAAAGAAGGCTTCATCCAGAGACATGTCCCTACTATCAGATGCAGAGAAGACGGACAGTGGGACAAGCCCAAAATCACATGCTTGAATCCGTCCACCTTCCAGAAGATGTATGCACACAAATACCAAAACAACAACTATTACAACAGCAGTAAGAGACGCTTCAGTGAATCTCAGTACCGCCATCGCTGGTCAAAAACAGCAGAAGAACTCAAACACTGATCTGCATCCAGATCTACTTCACGTCTATCTTTCAAGACAAAACATGTGCCTGATGAATGTTTTATAGAGCCGCAAAGTGAATTTCCCTGAGGgactgcaagaaaaaaaataatcataacaataaaaaaccACCACACAGAGCCACTGAGAGTGTACTTTGACTATGCAAATGAATACATTGCATTTAATAATACTGTCTTAATGTTTGGATGTTGGAATAGGGGGCGGGGCTTAAATGTATATAGTAGAAATGAGGATCAAGTCAACGCAGCTGTGAATTGGTGACTGTATTCATCCGTAAGTTTTGCTTGCGAAGAACTGGATTTCCTTTTCTCTCCGGCTCTTTAAGAGAGCACTATGGTACGAGCAGTTTACTGATAAAAGGACAATAggctttatatgtttgttttgaaTTGTGGCGAAGGGGTTTGAATGGGAGGTCACGAGTCCAGAGGACAAACAATGCTCAAAGACTGCAACTCATGACTGGAAAACAAATCTCCACCGTCATCATCATCTTCAGAGAACGCCATTGTACACTCTCACAATCATATGCTCATcaaaatatatctatattttttctgtgtgcattttgttttaaaacatgtgggGTTGTAATATAACcaatttgtttgttcttttaatGAATGTCATGGTaaagaatgaatatatgaatactGTATGTGTGGTATATGTGAATGAACTAGCATTTTTCTTTTGTCAAGCATTATTACAAATGTTATAAGCCACAGAAGTTTAATTTATTGCTGAAGATACATATAACGATGAATGAACTGTGAGATTTTGAATAATAAAGCGCTATTAGAATATTATCAATATGTTTACTTTGTGTGTGATCTTGCATTATTAAAAAGCCCATGTTAATTGCAGGTTTTTTTCTTCTCACAACAAGAACCTTCCTTTATAAAGCAATTTGATAAATTaatcaatggggtatatgccgaagcatgctaataggactttaatttgccagtaacctggattaagtgcttccggcgaattgaatgccaatgcaaaatccagtgcgtttaaggtctgttttctttaaaaatcagctaaATGATATCCAATTTAAAGTGGGTGTCAGATTGTATAAGAAGTACGGCAtgaaattacatttcccccgtcttgtctttataatatgagcatttattttaccacagtatattcaatggagcttctgtgttagcctgccgattctgacgggcgcgtgtgaGGAAACagcttttgtctcgttttacgcttgagcaactaaataaatgctaaagtttatttaacttaatgtatttaatgacattacaacatcgatgctgtaaaaggaaccgtataaaatggaaaaaagttcacaataacaggtcactggacgtgtatcagcatgggaacagcactagcttggcatataccctattgaaacattttaaaacatatactacataatattacttttaatttcaatacatttttatgtaaatgGTTTTGTGCTTTTGTTGAAAtgtataattttgttaaaattagaAGATACGCAGCATCAAAAAACATGTTAATTTCCCTCTATTAATCGCACGTTCTGCTGAGAACGTTAAAGCCTTCCTTGTAATTCAAACaacgttttaaaataataaactaagaAGGTTAAAATACTAATGTTATTgatttcagttcatttttttaTACAGATTGCAAGTATTTTTCtcttttgctaattttttttaattataaacattACAGAGCTTGTTT

Function

symbol description
vcanb Predicted to enable calcium ion binding activity; carbohydrate binding activity; and hyaluronic acid binding activity. Acts upstream of or within intramembranous ossification and skeletal system development. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Is expressed in several structures, including dermatocranium; otic vesicle; paraxial mesoderm; semicircular canal; and ventral fin fold. Human ortholog(s) of this gene implicated in intracranial aneurysm. Orthologous to human VCAN (versican).

GO:

id name namespace
GO:0001501 skeletal system development biological_process
GO:0007417 central nervous system development biological_process
GO:0007155 cell adhesion biological_process
GO:0001957 intramembranous ossification biological_process
GO:0031012 extracellular matrix cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005540 hyaluronic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2185 Predicted to enable calcium ion binding activity; carbohydrate binding activity; and hyaluronic acid binding activity. Acts upstream of or within intramembranous ossification and skeletal system development. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Is expressed in several structures, including dermatocranium; otic vesicle; paraxial mesoderm; semicircular canal; and ventral fin fold. Human ortholog(s) of this gene implicated in intracranial aneurysm. Orthologous to human VCAN (versican).

Ensembl:

ensembl_id ENSDARG00000009401

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004574 False 5586 mRNA 0.47 15 43188678 43262960
TCONS_00004575 True 6994 mRNA 0.44 14 43189325 43263885

Neighbor

gene id symbol gene type direction distance location
XLOC_002436 xrcc4 coding upstream 4324 43088270 ~ 43184354 (+)
XLOC_002435 atg10 coding upstream 112471 43037064 ~ 43076207 (+)
XLOC_002434 zcchc9 coding upstream 284962 42898103 ~ 42903716 (+)
XLOC_002433 NA coding upstream 367772 42819726 ~ 42820906 (+)
XLOC_002432 NA coding upstream 443098 42741085 ~ 42745580 (+)
XLOC_002438 rasa1b coding downstream 142911 43406796 ~ 43450588 (+)
XLOC_002439 NA coding downstream 254709 43518594 ~ 43525213 (+)
XLOC_002440 nr2f1b coding downstream 533245 43797130 ~ 43808197 (+)
XLOC_002441 NA coding downstream 564442 43828327 ~ 43938288 (+)
XLOC_002442 CR384089.1 coding downstream 729467 43993352 ~ 44024651 (+)
XLOC_002430 NA non-coding upstream 456684 42729946 ~ 42731994 (+)
XLOC_002429 NA non-coding upstream 465457 42720841 ~ 42723221 (+)
XLOC_002424 NA non-coding upstream 711419 42470616 ~ 42477259 (+)
XLOC_002445 NA non-coding downstream 791864 44055749 ~ 44198211 (+)
XLOC_002447 NA non-coding downstream 1117097 44380982 ~ 44383459 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000158_01309383_01335186 VCAN coding CI01000158 null 1309383 ~ 1335400 (+)