XLOC_002949 (PLEKHB1)


Basic Information

Item Value
gene id XLOC_002949
gene name PLEKHB1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 36731039 ~ 36738642 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005442
CCGAGTTACAAACAAAACACTTATCAGACCTGCAGCACAACACTGGgaatattgctttttttttgttgtggtgTCTGACTGGCCAGGGCTCATGATGGCTCTGCTCAAATCCGGCTGGCTCTGGAGACAGTCTTCTGTCCTCAAACGCTGGAAACTAAACTGGTGTGACCTGTGGATCGATggaagttttgttttttacaaaagtGAATCCAGAAGAGACTACGAGACCAAAGTGAATCTGAAGAGCAGCTGTGTGAATGTGAGGTCTGGACTGGAGTGTGCAGGTGTAGGTCCACCCGAGAGTCACCCAAGGGAAAATCTGCTGGTAGTTTATCTGAGAGACGGCACTATGCTGAGCCTGTGTGCCAACAGTGAAGACGAGGCACTgGCCTGGAAACTCACACTCATGGAGGCAAAGAGAAATcctGTTTTCACATATAATCCCTATGATGATACTTACCAGACTGTTCCAATTGACAGCCATAATGCAGTTTACATCATGCCAGGGACTCAGCATGTGTGGGTGCACAGAGACTCTTATGAGGACGGCTTTGGAGAGCAGATTGCACTGGGTCTCCTGGCAGGAATGGCCGCTGGTGCCGCGATGCGTTCACTTCTGTGGATGCCCTTCTGGTTCTGCTGAGGAGACGTCAAACCGCAGGATCTGAGAACAGACATCCGGAAAGCTCAGCGATAGCAAATGGTCCTTTTCCtgcatataaatatgtatatatgagtATAGCCAAAGCTGTTTTAAACGAAATATCGGAGTGTGTTTTTATTGCTGCTTTATTTCATTGTTTACACAGTCCAATTTTAGCTGCTTGGATTTATTGACACAGTTGAGATACTTGGCGAAACATCAAAAGATCTTTCTGTAGCATGTGTAGAAAATACCTGCACATAACAATGATTGTATTTTCTTGCTGCTATGATTCTGTATACTGTGAGAGAAATTTTGACCTTTTCCACACATTTcccattttctcaaaattctgaaTTTCTGTCTGACAATTCAACATATTTTTCGTGCAATACTTAATTAGGCATGGAACAAAAAccggtttcaaggtataccgtggtttggaaaagttaaggttttaaaaacgCCAAAATTtgtgctataccgttcctaagatatacagttaaaagtcagaattattagccccctgaattattagcccccctgtttaattttttacccaatttctttttaacggtgagcagactttttcaacacattcctaaacataatagttttaataacttatttctaataactgatttattttatctttaccacgatgacactaaataatatttgactagatattactagattttaagacacttctatacagcttaaagtgacatttaaaggcttaactaggttaattagattaactaggcaggttagggtaattagggaagttattgtataatgatggtttgttctgtagactatcggaaaacaATTTGTTTAAAggagttaataattttgtccccaaaatgttttttaaaaaatgtaaaactgcttttattctagccgaaataaaagaaataagactgactgaataattctgacttcaactgtatgtaagattttttatttatatatacagtatatatttttttggtttcttaggacaacagtatctccagaagaaaagatatccaaatatgCTATTTTAAATGGTACAGAAATTAGTGttattgaaacaaatgaagacagcaaaaattACCAACATGTTTACTGcgccaaaatattttaaatgtttctcaaaataaaatatattgtgttaaaaacttaaaattgtgTAGAAAATAAGAGGTTAAGAGGTAAttgtcatataaaaaataattaaatctctctttctttacatatatatatacaaacacacacacacacacacacatatatacatacacttaggtatgtgtgtgtgtgtatgtatatttatatatatatggatatacaTTCAAAACTGATACCAGAACTGGGCGGAAAAGAAATGTgaaaatttctttctttttttatttctgtgtcTGAAAAGGGCTTCGGTATGCtttgtttataatgtttataatgtctatacagtatatagtgtttgcttcagattttttttttttttttttggatgataaAAATTTTCCTTTCTTTATATCTTTATAGCACATTTATTTATCAAACTATATCTGATTACCCTAATTTATTATGTTGTGCACCATGAGGTTTGTAAGCACAAGTCAGACCGTTGATTGCTCTTAAACCCTCGTAATGatgctgtgatttatttttaGCTGCTGCCAAAAgccaaatatattttcattaagcAAATCAAGGTTTGTGAAATGCATCTGAAATGAACTGAAATGGCCAGAGCAGTATTTGGATCTGATATTTCCAAATATAAATTCTATATTTTTTTGTGAGAAATAAAAAAGCTGCTGCTATACAGAAACATTAAA
>TCONS_00005443
GCTGAGACGACTAACAGTCATCGCCGAGTTACAAACAAAACACTTATCAGACCTGCAGCACAACACTGGgaatattgctttttttttgttgtggtgTCTGACTGGCCAGGGCTCATGATGGCTCTGCTCAAATCCGGCTGGCTCTGGAGACAGTCTTCTGTCCTCAAACGCTGGAAACTAAACTGGTGTGACCTGTGGATCGATggaagttttgttttttacaaaagtGAATCCAGAAGAGACTACGAGACCAAAGTGAATCTGAAGAGCAGCTGTGTGAATGTGAGGTCTGGACTGGAGTGTGCAGGTGTAGGTCCACCCGAGAGTCACCCAAGGGAAAATCTGCTGGTAGTTTATCTGAGAGACGGCACTATGCTGAGCCTGTGTGCCAACAGTGAAGACGAGGCACTgGCCTGGAAACTCACACTCATGGAGGCAAAGAGAAATcctGTTTTCACATATAATCCCTATGATGATACTTACCAGACTGTTCCAATTGACAGCCATAATGCAGTTTACATCATGCCAGGTACAGGCTGTGGAgGGACTCAGCATGTGTGGGTGCACAGAGACTCTTATGAGGACGGCTTTGGAGAGCAGATTGCACTGGGTCTCCTGGCAGGAATGGCCGCTGGTGCCGCGATGCGTTCACTTCTGTGGATGCCCTTCTGGTTCTGCTGAGGAGACGTCAAACCGCAGGATCTGAGAACAGACATCCGGAAAGCTCAGCGATAGCAAATGGTCCTTTTCCtgcatataaatatgtatatatgagtATAGCCAAAGCTGTTTTAAACGAAATATCGGAGTGTGTTTTTATTGCTGCTTTATTTCATTGTTTACACAGTCCAATTTTAGCTGCTTGGATTTATT

Function

symbol description
plekhb1 Predicted to be involved in regulation of cell differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PLEKHB1 (pleckstrin homology domain containing B1).

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000063519

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005442 False 2469 mRNA 0.35 6 36731039 36738619
TCONS_00005443 True 873 mRNA 0.47 6 36732673 36738642

Neighbor

gene id symbol gene type direction distance location
XLOC_002948 pimr137 coding downstream 4851 36720166 ~ 36726188 (-)
XLOC_002947 mrpl48 coding downstream 39358 36684000 ~ 36691681 (-)
XLOC_002946 dnajb13 coding downstream 48517 36673387 ~ 36682522 (-)
XLOC_002945 AL845435.1 coding downstream 68428 36654197 ~ 36662611 (-)
XLOC_002944 NA coding downstream 80135 36642166 ~ 36650904 (-)
XLOC_002950 dhrs13a.2 coding upstream 46114 36784756 ~ 36793412 (-)
XLOC_002951 dhrs13a.1 coding upstream 57219 36795861 ~ 36808348 (-)
XLOC_002952 phf12a coding upstream 72730 36811372 ~ 36825984 (-)
XLOC_002953 sez6a coding upstream 89427 36828069 ~ 36927594 (-)
XLOC_002954 myo18aa coding upstream 212131 36950773 ~ 37075361 (-)
XLOC_002942 NA non-coding downstream 120138 36595380 ~ 36610901 (-)
XLOC_002939 NA non-coding downstream 261144 36465343 ~ 36469895 (-)
XLOC_002926 BX088524.4 non-coding downstream 567745 36163179 ~ 36163294 (-)
XLOC_002955 BX323076.2 non-coding upstream 302436 37041078 ~ 37042232 (-)
XLOC_002957 CT573231.1 non-coding upstream 613838 37352480 ~ 37357303 (-)
XLOC_002958 NA non-coding upstream 679592 37418234 ~ 37476245 (-)
XLOC_002960 NA non-coding upstream 990669 37729311 ~ 38025967 (-)
XLOC_002961 NA non-coding upstream 1126777 37865419 ~ 37889561 (-)

Expression


Co-expression Network