XLOC_002948 (pimr137)


Basic Information

Item Value
gene id XLOC_002948
gene name pimr137
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 36720166 ~ 36726188 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005440
GAGATCAACTCGCAGCGCTATGAAATTGGCGCTGAGCTGGGCAAAGGAGGCTTTGGAACGGTTTTCGCAGGGACCCGTTTACAAGATGGCCTTCAGGTTGCAGTAAAAATTGCTGATTTCAAAGTGAAGCCAGTCATCCATGTTGATGATTTTGATGAGCCACTTCCATCGGAGATCGCTCTGCACTTTCTTGCCAATAAAGGCCCCAAAGTGAATGAACTCGTTCAGCTCCTGGACTGGAAGGTGGAGGCTGATCGCTACATTATGGTCCTAGAGCGGCCCATACCCTGTGTGAGCGTGGGGGATTTTTTAAGAGGCTACAAAGGCAGAATCCCAGAGCACGTGTTGCAGAAAATCATGTACCACACAACAGTTGCGGCTGACACATGCAACACGCGTGGAGTGCTCCACCGCGATATCAAGCCTGACAACTTGCTGATGAACCCGAAGACCTTTGAAGTTAAACTGATTGACTTCGGGTGCGGTGACCTGCTTACTGATGACTATTACAGTCACTACTTAGGCACAATGCATTACTGCCCTCCTGAGTTTAACACGGCTGGTTATTACTTCGGGGAGCCAGCGACAGTGTGGTCACTAGGAATTCTCCAGTATCTCCTAATGTTCAAAAAATTTCCAAAAAGCGATGACCTCCTCAAGTTGAAAACAAGATATGTACTGCAATTTGGAAGGTCAAAAGaaTGCAGTGATTTTATCCGAAGTTGTCTGGAGATTAACTTCCCCTTGCGGCCCACGTTGCAAGCACTGCGTGTCCATGACTGGTTTAAGGTAATGAAAGGATTTTGAAATCAAATTAATCTGTCATGAGCTGAGTTTCCATCCTGATGTGAAGCACATCTTTTCTAAGT
>TCONS_00005441
ACAAGTATCTAGTGAGTTGTCGAAGTTTGCTTTGAATAATTTGCTTTTCTTATAGTGTCAATTGATTGCATACGGTTTATTAAGGCTTACTCTGATAGACGAGCTTTACCTACAGTAAATTTCAGTGTTTATTGTAGGTTTAGTTAACATTTCTCATATTTAAGTGTACGGAAATCAAACTAACATGTTATTTACCGTACTCGGAGTTCTTGCTCTCTTCCTGGGAGATATAAACACCAACACCACCGACCCAGGTCAAGATGAAAGATTGGACCATCAAGAAGAAGGATTGGTCGCGGTGCCCCCAGTGACCAACGGTGATGGTCGAGAAATCGGTGACGGGTGTAAAGAATCATCTTTACATCTGGAGGAACAGATCAATGTTCAGGCTGAGGAACCGTCATTGGAGGAACCTGTCGATGCTGAGTCCGGCTGTAGTCATGATGACCCTTCAAATGTGGTCTCTGCTGAGCCTGGCTTTCGAGATGATTCTGTTCCACTTCAGCCAGAAGAGCTGAAGGAAATCATTGAGATCAACTCGCAGCGCTATGAAATTGGCGCTGAGCTGGGCAAAGGAGGCTTTGGAACGGTTTTCGCAGGGACCCGTTTACAAGATGGCCTTCAGGTTGCAGTAAAAATTGCTGATTTCAAAGTGAAGCCAGTCATCCATGTTGATGATTTTGATGAGCCACTTCCATCGGAGATCGCTCTGCACTTTCTTGCCAATAAAGGCCCCAAAGTGAATGAACTCGTTCAGCTCCTGGACTGGAAGGTGGAGGCTGATCGCTACATTATGGTCCTAGAGCGGCCCATACCCTGTGTGAGCGTGGGGGATTTTTTAAGAGGCTACAAAGGCAGAATCCCAGAGCACGTGTTGCAGAAAATCATGTACCACACAACAGTTGCGGCTGACACATGCAACACGCGTGGAGTGCTCCACCGCGATATCAAGCCTGACAACTTGCTGATGAACCCGAAGACCTTTGAAGTTAAACTGATTGACTTCGGGTGCGGTGACCTGCTTACTGATGACTATTACAGTCACTACTTAGGCACAATGCATTACTGCCCTCCTGAGTTTAACACGGCTGGTTATTACTTCGGGGAGCCAGCGACAGTGTGGTCACTAGGAATTCTCCAGTATCTCCTAATGTTCAAAAAATTTCCAAAAAGCGATGACCTCCTCAAGTTGAAAACAAGATATGTACTGCAATTTGGAAGGTCAAAAGaaTGCAGTGATTTTATCCGAAGTTGTCTGGAGATTAACTTCCCCTTGCGGCCCACGTTGCAAGCACTGCGTGTCCATGACTGGTTTAAGGTAATGAAAGG

Function

symbol description
pimr137 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000088502

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005440 False 869 mRNA 0.46 4 36720166 36721726
TCONS_00005441 True 1329 mRNA 0.46 7 36720235 36726188

Neighbor

gene id symbol gene type direction distance location
XLOC_002947 mrpl48 coding downstream 28485 36684000 ~ 36691681 (-)
XLOC_002946 dnajb13 coding downstream 37644 36673387 ~ 36682522 (-)
XLOC_002945 AL845435.1 coding downstream 57555 36654197 ~ 36662611 (-)
XLOC_002944 NA coding downstream 69262 36642166 ~ 36650904 (-)
XLOC_002943 rsf1b.1 coding downstream 86240 36613004 ~ 36633926 (-)
XLOC_002949 PLEKHB1 coding upstream 4851 36731039 ~ 36738642 (-)
XLOC_002950 dhrs13a.2 coding upstream 58568 36784756 ~ 36793412 (-)
XLOC_002951 dhrs13a.1 coding upstream 69673 36795861 ~ 36808348 (-)
XLOC_002952 phf12a coding upstream 85184 36811372 ~ 36825984 (-)
XLOC_002953 sez6a coding upstream 101881 36828069 ~ 36927594 (-)
XLOC_002942 NA non-coding downstream 109265 36595380 ~ 36610901 (-)
XLOC_002939 NA non-coding downstream 250271 36465343 ~ 36469895 (-)
XLOC_002926 BX088524.4 non-coding downstream 556872 36163179 ~ 36163294 (-)
XLOC_002955 BX323076.2 non-coding upstream 314890 37041078 ~ 37042232 (-)
XLOC_002957 CT573231.1 non-coding upstream 626292 37352480 ~ 37357303 (-)
XLOC_002958 NA non-coding upstream 692046 37418234 ~ 37476245 (-)
XLOC_002960 NA non-coding upstream 1003123 37729311 ~ 38025967 (-)
XLOC_002961 NA non-coding upstream 1139231 37865419 ~ 37889561 (-)

Expression


Co-expression Network