XLOC_030453 (hint2)


Basic Information

Item Value
gene id XLOC_030453
gene name hint2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 53009083 ~ 53067934 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059504
cctacAGAACATGAGCACCGGATGTAAACAAATCTTTATAGTCTTTGGCATAGAGGGGGACGGTCACGAACGtagtttgtccttaaaatgacaGCCTGCGGTGTTTTACTAACCCGGCAGCTTTTGCCTTTTGGACGTGGTTTATGGCGTGTATTATCTGTCAAGAGCTGCTATTCTACCATAAATGACGAGGTTCGCTTGGCGCAAGAAGCCAGCAAAAAATACGGAAAACTTGAACCAACCATCTTTACGAAAATAATTGACAAAACTGTTCCAGCTGTTATCATTTATGAAGACGACAAGTGTCTTGCCTTCAGAGATGTAAATCCACAGGCTCCTGTGCATTATTTAGTTATTCCAAGGATTCCCATTCCCAGGATAAGTGAAGCACATGATGAAGATTCACTGATCTTAGGCCATCTGTTAGTGGTAGCCAAAAACATTGCAAAGAAAGAAGGCCTGGCTGAAGGGTACAGAGTTGTCATCAATGATGGAAAAAACGGTGCACAGTCTGTGTATCACCTTCACATTCATGTCCTTGGAGGAAGGCAAATGAAATGGCCTCCAGGATAGCTGAAACCTGTATATTTTTGAACAAGACATATAACCAGTACTAAGAAGGAGCTTTGGTGAATCTTattcaaaaaatgtaatgtaCTACTGTTTCCTCCAATAAAACTTGTTTTATTGAA

Function

symbol description
hint2 Predicted to enable hydrolase activity. Predicted to be active in mitochondrion. Is expressed in brain; head; inner ear; and somite. Orthologous to human HINT2 (histidine triad nucleotide binding protein 2).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0005739 mitochondrion cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070410-139 Predicted to enable hydrolase activity. Predicted to be active in mitochondrion. Is expressed in brain; head; inner ear; and somite. Orthologous to human HINT2 (histidine triad nucleotide binding protein 2).

Ensembl:

ensembl_id ENSDARG00000100938

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059504 True 692 mRNA 0.41 5 53009083 53067934

Neighbor

gene id symbol gene type direction distance location
XLOC_030452 scarb2a coding upstream 146278 52844681 ~ 52862805 (+)
XLOC_030451 apba1a coding upstream 275514 52625975 ~ 52733569 (+)
XLOC_030450 ptar1 coding upstream 387129 52596850 ~ 52621954 (+)
XLOC_030449 BX957336.2 coding upstream 566591 52438392 ~ 52442492 (+)
XLOC_030448 FP016029.1 coding upstream 783278 52225684 ~ 52225805 (+)
XLOC_030454 NA coding downstream 120070 53188004 ~ 53191067 (+)
XLOC_030455 NA coding downstream 123728 53191662 ~ 53192805 (+)
XLOC_030456 BX323994.1 coding downstream 411642 53479576 ~ 53484789 (+)
XLOC_030457 taf6 coding downstream 512912 53580846 ~ 53765478 (+)
XLOC_030458 sat2b coding downstream 757025 53824959 ~ 53865456 (+)
XLOC_030446 AL935198.1 non-coding upstream 951529 52055227 ~ 52057554 (+)
XLOC_030444 NA non-coding upstream 981352 52012883 ~ 52027731 (+)
XLOC_030440 CT033828.1 non-coding upstream 1198158 51810809 ~ 51810925 (+)
XLOC_030460 CR450749.2 non-coding downstream 1038076 54106010 ~ 54108514 (+)
XLOC_030464 NA non-coding downstream 1413825 54481759 ~ 54482867 (+)
XLOC_030470 NA non-coding downstream 1643089 54711023 ~ 54711655 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000080_01298042_01314713 NA coding CI01000080 null 1297573 ~ 1314973 (-)