XLOC_030773 (myo19)


Basic Information

Item Value
gene id XLOC_030773
gene name myo19
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 3943157 ~ 3991655 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059903
AGAATTCACTGGAAAGCCTGATGAAGATTTTGCACAGCACCACTCCACACTACACACGCTGCATTAAACCAAACCCGGACTGCAGACCACTCACTTTCCAAAAGGAAGAGGTCATCGCTCAGCTTGAAGCCTGTGGGATTGTGGAGACCATAAACATCAGTGCAGCGGGTTTTCCCATCAGGATCCCAAATGACAGCTTCTTCCAAAGATATGGGCTGATTGCAAACAACAGACTAGCAGCAAAGAAGAAAAGCCCTGAGATGGGATCAGTTGTAGAAGATGTGCTCAGTGTGGTCATCAAAAAACACTCCCCAAACTCCACCTTCAGTCCTgatgacaacaacaacatggTTCATTGTGGGAGAACAAAAGTCTTCCTCACGCACTCCCTGTTGGAGATCCTGGAGGAGCACAGGAACAGAGTGCGCTCACAGAAAGCGTTCAGCATCCAGTGCTGTTGGCGAAGGCACCAACAACGCCAGCGTTTCCTCCGGACACAGGCAGCCACATGTATACAAGCAGGTGTGAGATCCTGGAGGGTCAGAAGAGAGATTAAGAAGTGGCATAAAGCTGTATCAGTCATCCAAACCAAGTGGAGGCGCTGGAGAGCGTGGATGGATGCGCTAGCGGAGGCAGAGCTGGACGATGCAGAGGATTTAGTAGAAGAAGAAGCCGAAGCATCATTGATGCCGAATCTGCTGAAAGAGCGAGGCTCGGTCCAGCTGTGCAGCGTCCCGGAGCCGGTGCCGGTCAGAGGATGGCCTGTCGGTCTGGCCATGGCCTCCGCACCCTCTATCACTGTGTCTCTGACCGCCTCGGGCTTCCAGCGGATCATGTCCATCATGACCTGCATCAACATCCCGTTCAGACACGGCCAGTATAAAGTGAAAACCAACCAGTTTGACCAGGGGGTGGCGTCTATCCGAGCTCAGCCACGGGGCTCCATTAAGATGCATCTTCAGAGATCTCCACTGCTGTACGCGGACATGCATCCAGCGCACAAGACTGAAGTGGTGACCGGATTCAACCAGATCCTGCTGGAGAGAGACTGACTCGAGCTTTAATGCAAGCAATGCACCTTTGAAAAGCACTACACTACACATTATATAGCTGCCTTATTTATAGTGCAATTCTGTATTAGTTCTGTTGCGTTTACTCGCTCAggtttcagcttaaagtgccttTTATTTCCGCTGCGTTCAGTCGGAATATACTGTAGagcgttttattattattactttaaaatacTGAGCTTCCATTTTATACAAA
>TCONS_00059904
ATCGCCAAGGTTTTCTACACACACGCTGGCTGCACGCTAGTCGCCCTCAACCCCTTCCAGCCCATTCCTCACCTGTACTCTCTGGATGTGATGAGGGAATATCACTCTGCCCCTCAGCCTCAGGTAAAGACTAAAGTACATCAAAATGTAAAATTAGGTACCAAATGTTCAATTcgattcaattcagctttatttACATGGACGTCGCGCTGTCTGATGAAATATTATGCCACTGTGGCAACTTCTTCTCAGAGGTGCCAGGACACTGTAGAAAGGATAGAAAAACGAGTACTGGACTCCAACCCTGTCATGGAGGCTTTTGGCAATGCATGCACATTACGCAACAACAACAGCAGTCGCTTCGGAAAATACATTCAGCTTCAGCTCAACAGTTCTCAGTTGCTGGTTGGAGCATCAGTGCAGACGTATCTTTTGGAGAAGACCAGAGTGGCTTTCCAAGCACCAAATGAGAGAAATTTCCACATATTCTACCAGATGATGAAGGGAGCCACAGAGCAACAGAGACTGGAATGGATGCTGCCTCTGGAGCAAGACTTTGTTTGGCTGCCACATGCAGAGAAAACTTTAGAAGGTCTTCTGCAGTTGGGGAATGTGGACTTCAGTCCCGCACCAGAAGAGGCTCAGCCATGTGATCTCAGTGGACAATCCAAAGGTGTGATGTCGGCGGATCTGCTGCAGGTTTCTTTAGATGAGCTGCAGTCGTGTCTGATAGTGAGAACTCTGCGTGCTGGCAAACAAAACATCCTCAAACCTTGCTCTCAGTCCGAGTGTGGCATCCGCAGAGACTGTCTTGCTAAAGTCATTTATGCACAgcTATTTGACTGGTTAGTCACTTTCATCAACAACAGCATGTCTGCAGACAGTTCCATGTGGTGCAACTTTATTgGTCTGCTGGATGTGTATGGTTTCGAATGCTTCCTCCTGAATAACCTGGAGCAGCTGTGTATTAATTACGCTAACGAGAAGCTACAGCAGCACTTCGTGGCTCATTATCTGAAGGCCCAGCAGGAGGAGTATGTGAGTGAGGGGCTGCAGTGGTCTTTCATTCGTTACCAAGACAACCAGGGCTGCCTGGACCTGATTGAAGGCAGTCCCTCCAGCATCATCTCTCTGCTCAATGAGGAGTGTCGACTGAACAGAGCATCGGATGCAAAGAAGTTTCGTGTGCGTCTGGAGAAGGAGCTGTCAGATAATGCCAACATCAGCTGGGACAAGTTCAGCAAAGAGCCCCATTTCACTGTGGCCCACTACGCTGGCAGAGTCAGCTACCAGATTGAGGGCATGATGGAGAAGAACAAGGACCCAGTTCCCCCTGAGCTCATCTGTCTTCTACAAAAGTCCCAAGATTCATTGCTGAACAGCCTCTTTGCGGATGGTGACCGTGAGAGCGAGGGGTCTCGGGGACACAGTAAAGTGGTCACTGTTGTGTCCAAATTTAAGAATTCACTGGAAAGCCTGATGAAGATTTTGCACAGCACCACTCCACACTACACACGCTGCATTAAACCAAACCCGGACTGCAGACCACTCACTTTCCAAAAGGAAGAGGTATGGaaaatgatctatctatctatctatctatctatctatctatctatctatctattatattGTGTGTGGGTGCAGAAATACACTCACTGTGTTTACTATGCTCTGAGAGTTGAGCTGCTTATTTGGATTTTCTCAGACAAATCAAAGTAA

Function

symbol description
myo19 Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization and vesicle transport along actin filament. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of myosin complex. Predicted to be active in actin cytoskeleton; cytoplasm; and vesicle.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000073761

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059903 False 1269 mRNA 0.50 8 3943157 3960161
TCONS_00059904 True 1722 mRNA 0.47 14 3954614 3991655

Neighbor

gene id symbol gene type direction distance location
XLOC_030772 CU655870.1 coding downstream 6561 3935917 ~ 3936596 (-)
XLOC_030771 c1qbp coding downstream 15394 3914403 ~ 3927763 (-)
XLOC_030770 mlxipl coding downstream 54110 3862586 ~ 3889047 (-)
XLOC_030769 mlxipl coding downstream 103872 3819190 ~ 3839285 (-)
XLOC_030768 FO704648.1 coding downstream 258755 3683053 ~ 3684402 (-)
XLOC_030774 si:ch211-283g2.1 coding upstream 159159 4150814 ~ 4204601 (-)
XLOC_030775 si:ch211-283g2.2 coding upstream 217508 4209163 ~ 4219741 (-)
XLOC_030776 si:ch211-283g2.2 coding upstream 231860 4223515 ~ 4230370 (-)
XLOC_030777 si:ch211-283g2.3 coding upstream 240541 4232196 ~ 4245186 (-)
XLOC_030778 srrt coding upstream 262274 4253929 ~ 4297459 (-)
XLOC_030767 FO704648.2 non-coding downstream 272919 3660658 ~ 3670238 (-)
XLOC_030764 NA non-coding downstream 388348 3553600 ~ 3554809 (-)
XLOC_030763 NA non-coding downstream 441322 3473865 ~ 3501835 (-)
XLOC_030761 CABZ01084961.1 non-coding downstream 512802 3311008 ~ 3430355 (-)
XLOC_030782 NA non-coding upstream 629775 4621430 ~ 4622063 (-)
XLOC_030783 FO834903.1 non-coding upstream 648804 4640459 ~ 4643289 (-)
XLOC_030784 NA non-coding upstream 678616 4670271 ~ 4673865 (-)
XLOC_030785 CU915770.1 non-coding upstream 694020 4685675 ~ 4697367 (-)
XLOC_030786 CU915770.2 non-coding upstream 723077 4714732 ~ 4734142 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000171_00659729_00660264 MYO19 coding CI01000171 null 659729 ~ 660264 (-)
bowfin (Amia calva) AMCG00005639 NA coding CM030142.1 CM030142.1 6326196 ~ 6328995 (-)