G1194620


Basic Information

Item Value
gene id G1194620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 62879730 ~ 62880349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1362959
gagcatttgtgaacagcagttttcagttctttccacagattctcgtttggattcaggtctggactttgacttggccattctaacacctggatatgtttaattttgaaccattccattgtagattttgctttaggttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtctttggcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatctttcctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1362959 True 620 lncRNA 0.43 1 62879730 62880349

Neighbor

gene id symbol gene type direction distance location
LOC110487064 lg3bp coding downstream 367301 62506293 ~ 62512429 (-)
LOC118938345 LOC106595712 coding downstream 380540 62495039 ~ 62499190 (-)
LOC118938346 LOC106606432 coding downstream 405306 62469918 ~ 62474424 (-)
LOC118936370 LOC106595712 coding downstream 419735 62455727 ~ 62459995 (-)
LOC110487076 LOC106606418 coding downstream 450160 62422481 ~ 62429570 (-)
LOC118938348 LOC106606427 coding upstream 19258 62899607 ~ 62926919 (-)
LOC110487151 LOC105012845 coding upstream 56819 62937168 ~ 62957406 (-)
LOC110486089 LOC106606381 coding upstream 152063 63032412 ~ 63218815 (-)
LOC110517310 LOC106601910 coding upstream 426832 63307181 ~ 63309144 (-)
LOC110487088 otop2 coding upstream 476136 63356485 ~ 63361782 (-)
G1194616 NA non-coding downstream 4172 62875344 ~ 62875558 (-)
G1194591 NA non-coding downstream 56281 62823238 ~ 62823449 (-)
G1194521 NA non-coding downstream 144020 62730954 ~ 62735710 (-)
G1194523 NA non-coding downstream 151709 62726022 ~ 62728021 (-)
G1194551 NA non-coding downstream 168174 62710999 ~ 62711556 (-)
G1194621 NA non-coding upstream 2146 62882495 ~ 62882707 (-)
G1194660 NA non-coding upstream 21014 62901363 ~ 62901764 (-)
G1194671 NA non-coding upstream 49603 62929952 ~ 62931288 (-)
G1194686 NA non-coding upstream 52994 62933343 ~ 62933560 (-)
G1194692 NA non-coding upstream 80002 62960351 ~ 62960595 (-)
G1194306 LOC106600182 other downstream 419832 62455904 ~ 62499352 (-)
LOC118938342 LOC106606436 other downstream 705230 62164135 ~ 62174550 (-)
G1194074 NA other downstream 808895 62070109 ~ 62070835 (-)
G1194684 NA other upstream 55437 62935786 ~ 62937073 (-)
G1194933 NA other upstream 256691 63137040 ~ 63137722 (-)
LOC110485277 LOC106602060 other upstream 616749 63495359 ~ 63509387 (-)

Expression


Co-expression Network