LOC118938346 (LOC106606432)


Basic Information

Item Value
gene id LOC118938346
gene name LOC106606432
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 62469918 ~ 62474424 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941835.1
GTGATATTTTGGCTACCCCGTAATTCGATTCCAAATGACTCGGTATGTAAGCAGCTGTTTCATTACTCTGGTCGTTCTGTTCCTTTGGCGGGTCGAAGACATCGCAGACGCTTGCAGATGCCTCCCTCAGCATCCTCAACAGGCTTTTTGCAATGCAGAAATCGTGATCAGGGCGAAGGTGGTTGGAAAGAGAGCGGTGTCTAACGCCATCAAGTATGACATCGAACAGATCAAGATGTTCAAAGGTTGTGACCAGGTTATCCACGCCATCTTCACTTACACCACTTCGTGCAGCGTGACTCTAGAAATCAACAAGGAGTATCTCTTCACAGGCAAGCTGAAGACTGGAAGGATGTCTATAACACTGTGTGGCTATAATCCACCCTGGGAGGACTTGAGTGCTGCACAAAAGAACAGCTTGACTCACCGCTACCAAAGCGGCTGTGattgcaagATCATCCACTGCActtccctcccctgtccaatcAGCACCTCGGATACATGCCTGTGGACATACTTGGGAACCGACAATGGCCAAAACCTTGCCTGTATCAAGAGGCAAGATGGGTCCTGTGCCTGGTACAAGGGGATAGGACTACCCAAGAAGTAGTTCCTGGATATTGGAGACTCCTAAACTCTACAGGCCATCCACTCACTGCTCAGTGACTAAAGATGCCTGCAATTAATACATGAGTAAACACACCTACAAATGCAA
>TU1362491
TAGCTTAGGGTTGGAGGAAACCTACAGGACTGCAGCTCCCCAAGAACAGGATAGAGCCCTGCTACACTATTTTGCTTAAGTGATCAGGGCGAAGGTGGTTGGAAAGAGAGCGGTGTCTAACGCCATCAAGTATGACATCGAACAGATCAAGATGTTCAAAGGTTGTGACCAGGTTATCCACGCCATCTTCACTTACACCACTTCGTGCAGCGTGACTCTAGAAATCAACAAGGAGTATCTCTTCACAGGCAAGCTGAAGACTGGAAGGATGTCTATAACACTGTGTGGCTATAATCCACCCTGGGAGGACTTGAGTGCTGCACAAAAGAACAGCTTGACTCACCGCTACCAAAGCGGCTGTGattgcaagATCATCCACTGCActtccctcccctgtccaatcAGCACCTCGGATACATGCCTGTGGACATACTTGGGAACCGACAATGGCCAAAACCTTGCCTGTATCAAGAGGCAAGATGGGTCCTGTGCCTGGTACAAGGGGATAGGACTACCCAAGAAGTAGTTCCTGGATATTGGAGACTCCTAAACTCTACAGGCCATCCACTCACTGCTCAGTGACTAAAGATGCCTGCAATTAATACATGAGTAAACACACCTACAAATGCAAGTTGTTGTGATTTTTAAATTGTTTACTGGTCACTTCTACAAGTgcaatttaaaataaatatatatatataGCACTCAAGCTAATTTCTTATGTCATTCATTTGTCGCTTGTTTTTAAACTGGAACCAAAGGTGTTATTGAAACCCCAAATCGTTTTCGATATGCTTGTCTGTAAATGGAACAGTGTTCCTGAAATACCATAAAGCCTGGGACACATTGAACAGGGTGTAATGTATACATTTCAGATGGTATGTTCTATACATGAATAACAGTGTCTTCTGACATGAAAGGAATCATGTCGGTTTGAATGGAATCTCTAACATTAAACATTTGTCTACTGAATGTGGCCCTTCAGCAGTTTGGGGTCTAAACCAAGGCTTCAGCATTGTAATGTCATTGACCAAATAAAGCCACTTAGCTTCTTT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0052547 regulation of peptidase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941835.1 False 715 mRNA 0.48 5 62470465 62474424
TU1362491 True 1055 TUCP 0.43 6 62469918 62473962

Neighbor

gene id symbol gene type direction distance location
LOC118936370 LOC106595712 coding downstream 10470 62455727 ~ 62459995 (-)
LOC110487076 LOC106606418 coding downstream 40895 62422481 ~ 62429570 (-)
LOC110485307 LOC106606399 coding downstream 108878 62330233 ~ 62361587 (-)
LOC110487061 roa2 coding downstream 143433 62324031 ~ 62327032 (-)
LOC110487063 LOC106606447 coding downstream 151098 62317651 ~ 62319367 (-)
LOC118938345 LOC106595712 coding upstream 20615 62495039 ~ 62499190 (-)
LOC110487064 lg3bp coding upstream 31869 62506293 ~ 62512429 (-)
LOC118938348 LOC106606427 coding upstream 425183 62899607 ~ 62926919 (-)
LOC110487151 LOC105012845 coding upstream 462744 62937168 ~ 62957406 (-)
LOC110486089 LOC106606381 coding upstream 557988 63032412 ~ 63218815 (-)
G1194284 LOC106606433 non-coding downstream 68862 62397025 ~ 62401603 (-)
G1194277 NA non-coding downstream 116908 62353358 ~ 62353557 (-)
G1194276 NA non-coding downstream 117332 62352884 ~ 62353133 (-)
G1194121 NA non-coding downstream 234238 62235859 ~ 62236227 (-)
G1194334 NA non-coding upstream 52713 62527137 ~ 62527582 (-)
G1194264 NA non-coding upstream 90323 62564747 ~ 62567053 (-)
G1194367 LOC106601941 non-coding upstream 95521 62569945 ~ 62580456 (-)
G1194385 NA non-coding upstream 116218 62590642 ~ 62590922 (-)
G1194395 NA non-coding upstream 126098 62600522 ~ 62600793 (-)
G1194306 LOC106600182 other downstream 10567 62455904 ~ 62499352 (-)
LOC118938342 LOC106606436 other downstream 295965 62164135 ~ 62174550 (-)
G1194074 NA other downstream 399630 62070109 ~ 62070835 (-)
LOC110512085 LOC106601929 other downstream 453865 61946652 ~ 62016705 (-)
G1193568 NA other downstream 885205 61584774 ~ 61585260 (-)
G1194521 NA other upstream 256530 62730954 ~ 62735710 (-)
G1194684 NA other upstream 461362 62935786 ~ 62937073 (-)
G1194933 NA other upstream 662616 63137040 ~ 63137722 (-)

Expression


Co-expression Network