LOC118936370 (LOC106595712)


Basic Information

Item Value
gene id LOC118936370
gene name LOC106595712
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 62455727 ~ 62459995 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941834.1
GGTTCTGACTGTGGGAGGAGCTCACAGCCTGCAATAAAACGGGCTGATTACATCGAATGAAAACAGAGTTCTAGGTGTTAGTCTGTCTGGGAATATCTTTGCATGTTCTAGTGTAGTTTACAATACAACAGTTCTTTAGCTCCACGAGTAAACATTTTATCTTACGCTATAGAGATATTTTCCAAGATGACTTGGTCTGTAAGCAGTTGTTTCATCACTCTGGTCGTTTTGTTCCTTTGGCGGATCGAAGACATTGCAGAAGCTTGCAAATGCGCTCCTGTGCATCTTCAACAGGCTTTTTGCAACGCAGACGTCGTGATCAGGGCAAAGGTGGTTGGTGTGGAAGTTGTGTCTGGTAACACCAAGTATGACATCCAACAGATCAAGATGTTCAAAGGTCCTGATCGGGTTATCCACGCCATCTTCACTTCATCCTCCTCAGCCTCGTGTGGCGTGACCCTGGAAATCAACAAGGAGTATCTCTTCACAGGCAGCCTAAATACTGATGGGAGGATGCATATAGTCACGTGTGACTTTATTCAGTACTGGGACGACTTGAATGGCACACAAAAGAAGAGCTTGACTCAACGCTACCGAACCGGCTGTGCTTGCACGATCATCCGCTGCTCTTCCCTCCCCTGTCCCGTCAGCGCCCCAGATGAGTGCCTTTGGACAGACTGGTTGTTGAACGATGGCCAAAGCGGACCCCAGGCCAAGTACTCTGCCTGTCTCATGAATTTTGATGGGTCCTGTGCCTGGTACAGGGGGATGGCTCCATCCAAGAAGTAGTTCCTGGATATTGACTACTCCATAGTAACTCCACAGGCCTTCCACTCACTGCTCAGTGGCTAAATATGCCTGCAATTTAAAAACTGGTCACTTGTGCAATAAAAATAAACTACTCCTCAAATATA

Function

NR:

description
metalloproteinase inhibitor 2-like

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005576 extracellular region cellular_component
GO:0008191 metalloendopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941834.1 True 914 mRNA 0.47 5 62455727 62459995

Neighbor

gene id symbol gene type direction distance location
LOC110487076 LOC106606418 coding downstream 26157 62422481 ~ 62429570 (-)
LOC110485307 LOC106606399 coding downstream 94140 62330233 ~ 62361587 (-)
LOC110487061 roa2 coding downstream 128695 62324031 ~ 62327032 (-)
LOC110487063 LOC106606447 coding downstream 136360 62317651 ~ 62319367 (-)
LOC110487059 notum coding downstream 250423 62184006 ~ 62205304 (-)
LOC118938346 LOC106606432 coding upstream 10470 62469918 ~ 62474424 (-)
LOC118938345 LOC106595712 coding upstream 35044 62495039 ~ 62499190 (-)
LOC110487064 lg3bp coding upstream 46298 62506293 ~ 62512429 (-)
LOC118938348 LOC106606427 coding upstream 439612 62899607 ~ 62926919 (-)
LOC110487151 LOC105012845 coding upstream 477173 62937168 ~ 62957406 (-)
G1194284 LOC106606433 non-coding downstream 54124 62397025 ~ 62401603 (-)
G1194277 NA non-coding downstream 102170 62353358 ~ 62353557 (-)
G1194276 NA non-coding downstream 102594 62352884 ~ 62353133 (-)
G1194121 NA non-coding downstream 219500 62235859 ~ 62236227 (-)
G1194334 NA non-coding upstream 67142 62527137 ~ 62527582 (-)
G1194264 NA non-coding upstream 104752 62564747 ~ 62567053 (-)
G1194367 LOC106601941 non-coding upstream 109950 62569945 ~ 62580456 (-)
G1194385 NA non-coding upstream 130647 62590642 ~ 62590922 (-)
G1194395 NA non-coding upstream 140527 62600522 ~ 62600793 (-)
LOC118938342 LOC106606436 other downstream 281227 62164135 ~ 62174550 (-)
G1194074 NA other downstream 384892 62070109 ~ 62070835 (-)
LOC110512085 LOC106601929 other downstream 439127 61946652 ~ 62016705 (-)
G1193568 NA other downstream 870467 61584774 ~ 61585260 (-)
G1193386 NA other downstream 1178069 61275745 ~ 61277658 (-)
G1194521 NA other upstream 270959 62730954 ~ 62735710 (-)
G1194684 NA other upstream 475791 62935786 ~ 62937073 (-)
LOC110486089 LOC106606381 other upstream 582011 63032412 ~ 63218815 (-)

Expression


Co-expression Network