G1195525


Basic Information

Item Value
gene id G1195525
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 63711246 ~ 63714263 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1364124
TGAGGCTCCAGAGAAACTGGACTGTACCCAAGTTCCCACCCCCCTCTTAGGAGGAATCGGGGCCTAGGGGGAGAGGAGTATGTCCACACCCCTATCCCACATAAACACACCCCTACATGTACACATAATATTGATACTCACGACTGACTAACACAACATAACTGTGCATCCTCATATCCAGCAGAGGGTAGGAATATACAGGTTCATTTCACATTCAATCCTTTTCAGTTGGTAAGTCAAACAGGGTCATATGATTTCTGAAATGAGAAGAGGAAACGATCTGTTTGCAGCAGGGTTGAGGGGTCGAATTGaaaattacttttttttaaaaatcaggaTATTTTAATTTATGAATTTGCATTCTAAAATCGACACTTGAAAAATGTAATCGACCCCAACCATGCTTTGCAGCCATTGGACTAAGGCTCTAAGCATGGAATCATTAAAACAAAAGAGACCCCGAGCAGTAAGTTATACGGAGGAGAAGACAGCCCTTCTCAAAGCCAATCAGATGACTGACTTCCATATTCTACTTCAAACTCCACTTGAGGCACAAGACAGGACACCCACCACCTGCAAACATTCAGTGACATGTAAAACCAGAGAAAACACATTACAATTAAACACAGCCGTCAAAAACACACCTGTGACTCACACAATTTTAAACCAATCTTTTTAAAGAAGATGTGGAATTGGGTttaattgactggaatttaaatagaattgaccccaaccctgacccctaCTGCTACGCACTTCCCCATTCATTAACGCTCAGCTCTGTATGAGCCAGATGAGAGGCAACAAAATGGTGGAAACTCAGCTCGCCAAAATTAGAGACGTCCTTGGtcaaaaaacaaccctttttACAAAGCCTTGAATGCTCTTCCCGGACCCTTCCATCATATTGATTACACATAGTGCTTCCCTGCACACTGCAAAACACTGAAGATGAGGGCTTGGGTTTCTCTCTATATTATACAACTGCTTATACAGTCTTTTCAGCCCTCCAAGAGGATATAGAGAAGTGCTGCATTGTGGTGGTAAGAGATCAGGTTGGGTTTAAAATTGGCCCATCACTCAAGAGCACTACATTGGACCATCTACAAGCCACTCAAGAGGACTACAATGGAGAGTGGCGAAAACATGGCGGTGCCTCAGACAGTCCTCTTCCCCGTAGAAAAGGAGATTTTAAAATAGAAGACAAGTTGTGGAGCATCACCACAAGTAGAGTACATTTAGCCCTGATTGGTCAATCGCTGCACTTGTAGACTCGAGGTCTAGGATGTGATTGGGTTTAGGAGTCTGCAATATGATTGGTTGTTCTGAGAGTAACGTTCAAGAGATTGGCCAAAGGTGTTGGGTACTATATTCTGATTGGGTCCTGTTGTTGGATGATGTGCTCTGATTCGGTGCAATGTTTGCTAGCGTGTCCTGATTGTTGGGTCTGACTAGTATGAGCAGCTGAGACACACAATAAAATAAATGGGGGGACAAGGATGGAAACAGAAAGAGATTGTTTAGATCAACATGAGATTTAATGGCAGTCCTAGTatcagtctgtggtgtagtctcagtcctagtgaaggtatgtcagtctgtggtgtagtctcAGTCCTGGTGAAGGTatgtcagtctgtggtgtagtctcAGTCCTGGTGAAGGTAcgtcagtctgtggtgtagtctcAGTCCTGGTGAAGGTatgtcagtctgtggtgtagtctcagtcctagtgaaggtatgtcagtctgtggtgtagtctcagtcctagtgaaggtatgtcagtctgtggtgtagtctcagtcctagtgaaggtatgtcagtctgtggtgtagtctcAGTCCTAGTGAAGGTATGTCAGTCTGTGGTGTGGTCTCAGTCCTAGTGAAGGTATGTCAGTCTGTGGTGTGGCCTCAGCTTTAAAGTGCAGATCATACTTGTTTGGTTTGTTGTCGTCTTTTTATGTCTGGTTCTTCTTTTGGAATGATTCCAActacccctttccctctctccctccctccttcagtaGTCCTCCACCCATCCATTCTCCATGATGAAAGCATCGATGACCTCTTTCATGGCCAGATTAGGAATCAGCTGGTCTTGAGTCAGAGGGCTGCGTGTCACCGGGTCAAAATGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1364124 True 2144 lncRNA 0.44 3 63711246 63714263

Neighbor

gene id symbol gene type direction distance location
trub1 trub1 coding downstream 10531 63699247 ~ 63700715 (-)
LOC110487455 LOC106601935 coding downstream 78104 63627507 ~ 63633142 (-)
LOC110487439 mkk6a coding downstream 84955 63601361 ~ 63626291 (-)
LOC110485277 LOC106602060 coding downstream 201859 63495359 ~ 63509387 (-)
LOC110487426 LOC106606390 coding downstream 249612 63448495 ~ 63461634 (-)
LOC110487444 LOC106601894 coding upstream 119 63714382 ~ 63721873 (-)
LOC118938350 NA coding upstream 26018 63740281 ~ 63763190 (-)
LOC110487429 LOC106601877 coding upstream 83990 63798253 ~ 63812083 (-)
LOC110487446 LOC106606413 coding upstream 105961 63820224 ~ 63825369 (-)
LOC110487454 gys1 coding upstream 124131 63838394 ~ 63863342 (-)
G1195514 LOC106606343 non-coding downstream 15506 63680056 ~ 63695740 (-)
G1195512 LOC106606343 non-coding downstream 17913 63676957 ~ 63693333 (-)
G1195499 NA non-coding downstream 71600 63638966 ~ 63639646 (-)
G1195496 NA non-coding downstream 86499 63624480 ~ 63624747 (-)
G1195494 NA non-coding downstream 90378 63620569 ~ 63620868 (-)
G1195529 NA non-coding upstream 22112 63736375 ~ 63790647 (-)
G1195555 NA non-coding upstream 28683 63742946 ~ 63746490 (-)
G1195554 NA non-coding upstream 34150 63748413 ~ 63755745 (-)
G1195562 NA non-coding upstream 69253 63783516 ~ 63786090 (-)
G1194933 NA other downstream 573524 63137040 ~ 63137722 (-)
LOC110486089 LOC106606381 other downstream 629673 63032412 ~ 63218815 (-)
G1194684 NA other downstream 774173 62935786 ~ 62937073 (-)
LOC118938348 LOC106606427 other downstream 784430 62899607 ~ 62926919 (-)
G1195624 NA other upstream 230813 63945076 ~ 63945764 (-)
LOC110487482 LOC106606373 other upstream 620430 64334669 ~ 64362841 (-)
G1195997 NA other upstream 762707 64476970 ~ 64477372 (-)
G1196113 NA other upstream 1080385 64794648 ~ 64795071 (-)
G1196205 LOC106606311 other upstream 1237527 64951790 ~ 64963785 (-)

Expression


Co-expression Network