XLOC_033430 (si:ch211-220f21.3)


Basic Information

Item Value
gene id XLOC_033430
gene name si:ch211-220f21.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 6317866 ~ 6339577 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065452
AAGAGGAAACATTCAGTGGACATACAGCTGGTTTAAAGATGGCTCATTGATTCCATACATCAATGAGAGAGTCTTCGCCATCACTTCTGCGTCTGACACTGGTAAATACAGCTGTGAAGGAAAAATCAGCAGTGATGCTGTGTATGTGACTGTATCAGatttcaccacaccACTGACTCCGCCATCAAATACTCTCCACACATCACAGTTACAAAATTACACATTTGACATGAACGAAACAACATATTCAGctttacCCACACCTACAGTGACTGACACCAGACAGTGCTGTATTCACAAGATAAatttcaccacaccACTGACTCCGCCATCAAATACTCTCCACACATCACAGTTACAAAATTCTATATCAGTAATGACCGGGAACATAACATATTCAGCGAGACCAAAGCCTGTAGTGAAGGTGAGTCCAGATCAGCATGTGTTCATTGGAGAGACAGTCACTCTCACATGTGACATACAGACAGGAGGAAACATTCAGTGGATCGGATACAGCTGGATTAAAGATGGAGACACTCACAATCCACACAGAACAACATCAGCAGCAGAGTTGAGTTTCAGAGCTGTTTCTGCGTCTGTCAGTGGTCAATACAGCTGTAGAGGAGAGAGATCAGACTCACAGAGATCAGACATCAGTGATACTCTTACACTGACTGTATCAGctttACCCAGATCTAGAGTGACTGTGACACCAGACAGTGCTGTATTCACTGAAGAGACAGTCAATCTGACGTGTGTGATTGAGTCTGATCACAGTGACTGGACATATGAGTGGTATAAAGACAGAAACAGTGTAAATTTACAGTCTGATGGTCGTTACACTGTAAACAGAGACACTCTCACTATCAGAGGAGCTGCTGAATCTGATCAGGGTCAGTACTGGTGTAGAGGACAGAGATCTGGAAGACCAAACTCATCACAATCAAGCTCTGCTGTTTCTCTCTCAGTGAAGGCCTTACCCATGCCTACATTGCATGCGAGACCAGGCAATCCTGTATTTACTGGAGAGCCAGTCAATCTGAAGTGTGTGATTGAGTCTGGTCACAGTGACTGGACATATGAGTGGTATAAAAACAGAAACAGTGTAAAGATACAGTCATCTTCTCGTCAAACTGTAAACAGAGACACTCTCACAATCAGAGGAGCTGCTGAGTCTGATCAGGGTCAGTACCAGTGTAAAGGACAGAGATCTGGAAGACCAAACTCATCACAATCAAGCTCTGCTGTTTCTCTCTCAGTGATGCCGAGACCGAAGCCTGTAGTGAAGGTGAGTCCAGATCAGCGAGTGTTCACTGGAGAGACAGTCACTCTCACATGTGTCATACAGACAAGGGAAAACATTGAGTGGGTCAAATACAGCTGGATTAAAGATGGAGACACTAACAATCCACACAGAACAACATCAGCAGCAGAGTTGAGTTTCAGAGCTGTTTCTGCGTCTGTCAGTGGTCAATACAGCTGTAGAGGAGAGAGATCAGACTCACAGAGATCAGACATCAGTGATGCTGTTACACTGGCTGTATTGGCTTTACCCACACCTACAGTTACTATGACAGAGATGATCATTCTGAAGTGTGTGATTGAGACTGGTCACAGTGACTGGAAGTATGAGTGGTATAAAGACCGAAACGGAGTCAAGTTACAGTCGTCTAATCGTCACATTGTAAACCGAGACACTCTCACTATCAGAGGAGTTAAGCCTGATGAGAGTTTCTATGAGTGTAAAGGACTCATAGATGGAAGATCAGTCTCTATACAATCAACATCTTTTTTCATTGTCAAACCTCAGATTTCTGCCTGTAAGATTGTCTTTTTTCTTCTGGCTGTTTGTCCGTTTCTGTCAGCGACAGTCGTGCTGCTCTTCAAAATCTACAAAGCGAGAGCTCAATCTGCTAAAGCACAGAGTCAGAACGCCGTTGTAGAGGAATTAACTTCACCTTGATTTAAGCATGTTTAACATATAAAGATTCTGAATGTTGATCTTTAATGCTGTTATTATTGCAACACTTTAATAACCTTATATATTTGGTTATTTTTCATGAAACATTACATATATTCTATTAGTGTTGTTTTTAAAGGCTGTAAATTTTTGACTTTTTATCAGATAGTACAtaattttctttgtattttagtGTTTTGAACCAGTTTGCTCTTCTAGATAGCATGCTTGAATAACTGATTGTAGAACAAAACATGAGtgtgtaataaatacatttaaatgtttcttc

Function

symbol description
si:ch211-220f21.3 Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105379

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065452 True 2249 mRNA 0.41 11 6317866 6339577

Neighbor

gene id symbol gene type direction distance location
XLOC_033429 NA coding upstream 65205 6249392 ~ 6252661 (+)
XLOC_033427 si:dkey-23a13.22 coding upstream 74436 5977707 ~ 6243430 (+)
XLOC_033428 NA coding upstream 260504 6053845 ~ 6057362 (+)
XLOC_033426 si:dkey-23a13.21 coding upstream 340624 5976613 ~ 5977242 (+)
XLOC_033425 hist1h2a11 coding upstream 341875 5975194 ~ 5975991 (+)
XLOC_033431 si:ch73-368j24.17 coding downstream 46087 6385664 ~ 6394666 (+)
XLOC_033432 FP340257.1 coding downstream 80858 6420435 ~ 6438540 (+)
XLOC_033433 si:cabz01036022.1 coding downstream 140635 6480212 ~ 6521757 (+)
XLOC_033434 pnp5a coding downstream 313390 6652967 ~ 6668424 (+)
XLOC_033435 CU459024.1 coding downstream 358396 6697973 ~ 6698091 (+)
XLOC_033416 NA non-coding upstream 370739 5943810 ~ 5947127 (+)
XLOC_033406 NA non-coding upstream 490366 5826581 ~ 5827500 (+)
XLOC_033405 NA non-coding upstream 499490 5814145 ~ 5818376 (+)
XLOC_033443 NA non-coding downstream 926105 7265682 ~ 7275388 (+)
XLOC_033444 NA non-coding downstream 936274 7275851 ~ 7279896 (+)
XLOC_033446 NA non-coding downstream 1080635 7420212 ~ 7422923 (+)
XLOC_033450 NA non-coding downstream 1215183 7554760 ~ 7563288 (+)

Expression


Co-expression Network