XLOC_033426 (si:dkey-23a13.21)


Basic Information

Item Value
gene id XLOC_033426
gene name si:dkey-23a13.21
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 5976613 ~ 5977242 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065450
ACGTACGTACTTGTCGGAAGAGAAGAACAAATCCTGATCTCGCAGCTATGGCAAGAACCAAGCAGACCGCTCGTAAATCCACCGGAGGAAAGGCTCCGAGGAAGCAGCTCGCCACCAAAGCTGCCCGTAAAAGCGCACCGGCCACCGGTGGTGTCAAGAAACCTCATCGTTACAGGCCTGGTACCGTGGCTCTGAGAGAGATCCGCCGTTATCAGAAATCCACTGAGTTGCTGATCCGCAAACTGCCCTTCCAGCGTCTGGTGAGAGAAATCGCTCAAGATTTCAAGACTGATCAGCGTTTCCAGAGCTCCGCCGTCATGGCCCTGCAGGAGGCCAGTGAGGCTTATCTGGTGGGTCTGTTTGAGGACACAAACCTGTGCGCCATCCACGCCAAGAGAGTCACCATCATGCCCAAAGACATCCAGCTGGCCCGCCGCATCCGCGGAGAGCGCGCTTAAATAGCTGCTGCACTAAACccaaaggctcttttaagagccacccatATCTCcctttaaaagacatttttttgtgattgttttagtaaaaataacTTTGTCTATTTTAAATGGTATTATAAATTACagtttgaaaacaaatattttattacagCTTTAAAAATGGTGAACATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105508

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065450 True 630 mRNA 0.48 1 5976613 5977242

Neighbor

gene id symbol gene type direction distance location
XLOC_033425 hist1h2a11 coding upstream 622 5975194 ~ 5975991 (+)
XLOC_033424 zgc:163040 coding upstream 7622 5968225 ~ 5968991 (+)
XLOC_033423 CU459186.3 coding upstream 10505 5965611 ~ 5966108 (+)
XLOC_033422 si:dkey-23a13.17 coding upstream 11598 5964296 ~ 5965015 (+)
XLOC_033421 zgc:112234 coding upstream 15110 5960491 ~ 5961503 (+)
XLOC_033427 si:dkey-23a13.22 coding downstream 465 5977707 ~ 6243430 (+)
XLOC_033428 NA coding downstream 76603 6053845 ~ 6057362 (+)
XLOC_033429 NA coding downstream 272150 6249392 ~ 6252661 (+)
XLOC_033430 si:ch211-220f21.3 coding downstream 340624 6317866 ~ 6339577 (+)
XLOC_033431 si:ch73-368j24.17 coding downstream 408422 6385664 ~ 6394666 (+)
XLOC_033416 NA non-coding upstream 29486 5943810 ~ 5947127 (+)
XLOC_033406 NA non-coding upstream 149113 5826581 ~ 5827500 (+)
XLOC_033405 NA non-coding upstream 158237 5814145 ~ 5818376 (+)
XLOC_033404 BX000524.1 non-coding upstream 192460 5737873 ~ 5784153 (+)
XLOC_033403 BX005156.1 non-coding upstream 368576 5573759 ~ 5608037 (+)
XLOC_033435 CU459024.1 non-coding downstream 720731 6697973 ~ 6698091 (+)
XLOC_033443 NA non-coding downstream 1288440 7265682 ~ 7275388 (+)
XLOC_033444 NA non-coding downstream 1298609 7275851 ~ 7279896 (+)

Expression


Co-expression Network