XLOC_003372 (slc25a26)


Basic Information

Item Value
gene id XLOC_003372
gene name slc25a26
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 16216909 ~ 16324575 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006608
GTGACGTCTGTGCGAATGCCCGCCCTAAACATGGCAGCGCCCTTGCTGAACGTGTAGTTGTTGTACGAAGTGTCAAAGATGAACCGCCTAACAAAGTCACCTGGCAAATGCTGAAGTCCTCGAGTACAGTATGGACAGACGAGAGTTCACAGCCTCCCTTGTGGCAGGCGGGTGCGCAGGAATGTGTGTAGATCTCACTCTCTTCCCACTGGACACCATTAAGACAAGGCTGCAGAGCCAGCAGGGCTTCTACAAGGCGGGAGGTTTCCGAGGGATCTATGCAGGAGTCCCATCTGCTGCCATAGGCTCCTTTCCTAATGctGCCGCATTCTTTGTCACCTATGAAAGCACCAAGTCCGTTTTCTCTGGCTACACCACAACAAACCTGGCCCCCATCACTCACATGCTGGCTGCTTCACTAGGAGAAATCGTTGCCTGTCTGATCCGTGTGCCCACTGAAGTCGTAAAGCAAAGGACACAAGCCAATCCCTCCATCAGTACCTACAGAGTGCTGCTGAACTCACTACAGGAAGAGGGATTCAGAGGGCTGTACAGAGGTTATGGCAGTACAGTACTAAGAGAGaTCCCATTCTCACTGGTGCAGTTTCCACTCTGGGAGTACCTAAAGGCCGTGTGGTGGAGGAGGCAGGGGGGACGGCTGGACTCTTGGCAGGCTGCAGTGTGCGGAGCTCTTGCAGGTGGAGTAGCTGCGTTCGTCACGACACCACTAGATGTGGCGAAAACCTGGATCATGTTGGCTAAGGCTGGGACGAGTACAGCCAGTGGAAACATCCCTATGGTTTTGTGTGAGGTGTGGAGGAGCAGAGGAATACCAGGGCTGTTTGCCGGCAGCATCCCCAGAGTGATGTTCATCAGCATGGGAGGCTTCATTTTCCTCGGAGCATATGAGAAAGTGCGCCGTACGCTTTTATAAACACCTTCTGTGGCTCGGTTTGTACTGGACCGCTTTCCTCAAGCCAAACCCTCACTGTACGGCCAAAACTGCAAAAGCAAGGAGCAAACTGCCAACCGGCACCAGAGGCCAGTGGAGGCTGGTCAGATCTGACAGAGAAATGCACCCTCTGTCCCAGTTTGAACCGGTGGTCTTGGGGGGCCACGGCGAGGACACCTGGTGCCTGGATGAAAAAGATCACATAACACAGTGGTTTGCATTCCTGCTTATCAGTGCACAACAGATTGAGTTTAACTGCGTGAATTCCACTTATGTAGCACCACAGATCAGGTTTAAACTCAGATGTCCTTTTTCTGCAAGCATATGTCAATCTATTAAAGCGTTTTTATAAAAATGCA
>TCONS_00006609
AGTTGTTGTACGAAGTGTCAAAGATGAACCGCCTAACAAAGTCACCTGGCAAATGCTGAAGTCCTCGAGTACAGTATGGACAGACGAGAGTTCACAGCCTCCCTTGTGGCAGGCGGGTGCGCAGGAATGTGTGTAGATCTCACTCTCTTCCCACTGGACACCATTAAGACAAGGCTGCAGAGCCAGCAGGGCTTCTACAAGGCGGGAGGTTTCCGAGGGATCTATGCAGGAGTCCCATCTGCTGCCATAGGCTCCTTTCCTAATGctGCCGCATTCTTTGTCACCTATGAAAGCACCAAGTCCGTTTTCTCTGGCTACACCACAACAAACCTGGCCCCCATCACTCACATGCTGGCTGCTTCACTAGGAGAAATCGTTGCCTGTCTGATCCGTGTGCCCACTGAAGTCGTAAAGCAAAGGACACAAGCCAATCCCTCCATCAGTACCTACAGAGTGCTGCTGAACTCACTACAGGAAGAGGGATTCAGAGGGCTGTACAGAGGTTATGGCAGTACAGTACTAAGAGAGaTCCCATTCTCACTGGTGCAGTTTCCACTCTGGGAGTACCTAAAGGTGCTCTCGAAATGACGCTGCATTTTATTAGTCACCATCACCGGTGGTTAAGCAGAATCGTAATTTCTCCCAAAGCGTGGGTCCAACTGTCCATTTCCGTCTTCATTGTCTGGTCCGGGCCACATAAAAGTCATTTTTCTTCTCCAAAAAAAGAGAAGGCCCAGTTTGTGAGAATGACATCATGTCTCCAGGGCGCGAGCAGAAAATTCCATTAGCGATTTTGGCCTGGTGAGTGGAGCAAGAGAGGCATCGGAGGACAAAAGCACGTGCAGCTGTGGGCGAACGTTAAGCGTGGTT

Function

symbol description
slc25a26 Predicted to enable S-adenosyl-L-methionine transmembrane transporter activity. Predicted to be involved in S-adenosyl-L-methionine transport. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 28. Orthologous to human SLC25A26 (solute carrier family 25 member 26).

GO:

id name namespace
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-050913-126 Predicted to enable S-adenosyl-L-methionine transmembrane transporter activity. Predicted to be involved in S-adenosyl-L-methionine transport. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 28. Orthologous to human SLC25A26 (solute carrier family 25 member 26).

Ensembl:

ensembl_id ENSDARG00000058208

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006608 False 1311 mRNA 0.52 10 16216909 16324575
TCONS_00006609 True 870 mRNA 0.50 7 16216964 16282275

Neighbor

gene id symbol gene type direction distance location
XLOC_003371 tada3l coding upstream 37719 16152316 ~ 16179190 (+)
XLOC_003370 pimr204 coding upstream 75373 16137302 ~ 16141536 (+)
XLOC_003368 ctbs coding upstream 133301 16070438 ~ 16083608 (+)
XLOC_003367 agtrap coding upstream 152618 16040517 ~ 16064291 (+)
XLOC_003366 draxin coding upstream 203795 15931188 ~ 16013114 (+)
XLOC_003373 kbtbd8 coding downstream 250050 16574625 ~ 16588044 (+)
XLOC_003374 NA coding downstream 768503 17093078 ~ 17170177 (+)
XLOC_003375 CR769769.1 coding downstream 813273 17137848 ~ 17141887 (+)
XLOC_003376 CR631124.1 coding downstream 1003990 17328565 ~ 17328681 (+)
XLOC_003377 BX571952.1 coding downstream 1116016 17440591 ~ 17513632 (+)
XLOC_003369 CR854846.2 misc upstream 93827 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 3504913 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 3522646 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 3531310 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 3536881 12679732 ~ 12680028 (+)
XLOC_003363 FP016142.2 non-coding upstream 415513 15799383 ~ 15801396 (+)
XLOC_003362 FP016142.6 non-coding upstream 437658 15776072 ~ 15779251 (+)
XLOC_003359 NA non-coding upstream 875496 15339344 ~ 15341413 (+)
XLOC_003358 CR550302.2 non-coding upstream 1198385 15017185 ~ 15018524 (+)
XLOC_003378 CR589944.3 non-coding downstream 1594568 17919143 ~ 17920013 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000056_00332365_00347030 SLC25A26 coding CI01000056 null 332259 ~ 347030 (-)