XLOC_003370 (pimr204)


Basic Information

Item Value
gene id XLOC_003370
gene name pimr204
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 16137302 ~ 16141536 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006601
CGATCCAGAGCCTGTGCCTGGACCATCTAGGCTCCAGGACAAGGCTAATGTGAAGTCCTCATCTGCTTCAGGAGCCCCTGGTTTTGAACCAAATAGAGGATCTTTGACTGGTCTTTACAGCATTGGAAAAATGATAGGATCCGGGGGCTTCGGCTCAACATTCAAAGCAGTCCGTAGATCTGATGGCAAGGAGGTTGCCATCAAGAAGATTCCGAAGAGCAACTATCCATGTTACATCTCTGTTCCTGGCTGTTCCAACCTTGTGTGTAAAGAAGCAGCATATCTGAACATGCTGAAACACCCTTCAGCAAGCATGCACGTGATAGAAATGTATGAGTGGTTTGATCAAGATGGGTTCATTTCACTCGTCATGGAGTACCCCCAACCTTGTGTATCTCTGCGGGACTATATATACATGCATGGCAAGCTGAAAGAACCGGTCGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATCCAGCACTGCGTTGAGCATGGTGTTTCCCACAACGACATGCATGCTGACAACATCCTAGTCAACACAACGAAAGTGGAGCTCAAGCTGATTGACTTTGGCTGTGCTACCAAAATCTGGGCAGAAGATTATGAAAGTGTCGTCTTGACATACATCTGGACCATAGGCTACATGCTGTATTACATGGTGAATGGTAAATATCCAGTGTACAGAACTTCTGGAACGGAGCGCCGCCGTTTGTTTGGTCCCAAAGTATCCAGTGACTGCTGTGATCTGATAGAAAAGTGCCTGGATAACAAATTGTCAAGACTGGTGGACATCTTACAGCACAAGTGGATGAAGAATCAGGAGATGAAGAAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTCAACAAAACAATTGTCAAGAATCATCAAAACTCATCTATAAAGAAGCCTTCATAGATGAGAACTACCAGAACCACCATCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTTCATGGGATCGGCATTCAGCAGAgacattacactgaactgaacttcaacagacatttgttaagctgctttgacaacaTCTGCATTGTATAAGTTttgtaaataaagatgaattgactGTA
>TCONS_00006602
GAAGATTCCGAAGAGCAACTATCCATGTTACATCTCTGTTCCTGGCTGTTCCAACCTTGTGTGTAAAGAAGCAGCATATCTGAACATGCTGAAACACCCTTCAGCAAGCATGCACGTGATAGAAATGTATGAGTGGTTTGATCAAGATGGGTTCATTTCACTCGTCATGGAGTACCCCCAACCTTGTGTATCTCTGCGGGACTATATATACATGCATGGCAAGCTGAAAGAACCGGTCGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATCCAGCACTGCGTTGAGCATGGTGTTTCCCACAACGACATGCATGCTGACAACATCCTAGTCAACACAACGAAAGTGGAGCTCAAGCTGATTGACTTTGGCTGTGCTACCAAAATCTGGGCAGAAGATTATGAAAGTGTCGTCTTGACATACATCTGGACCATAGGCTACATGCTGTATTACATGGTGAATGGTAAATATCCAGTGTACAGAACTTCTGGAACGGAGCGCCGCCGTTTGTTTGGTCCCAAAGTATCCAGTGACTGCTGTGATCTGATAGAAAAGTGCCTGGATAACAAATTGTCAAGACTGGTGGACATCTTACAGCACAAGTGGATGAAGAATCAGGAGATGAAGAAGGGATGA
>TCONS_00006603
AAAGTACTAAAGCAGGGTAAAGTACATGTAAAGGATAAGTTTGCCCAAGCATTAAATCATTGTTTACTTACCCTGTGATTCTAATCCTCTGAGACCTTTGTTCCTCCTCAAAACCcaaaagatattttagattaaatttgaGCTCGCTCTTCTGCTATAGATGGCAAGGGTCCTGAGAAGCTCAAATCCAGAAAAGGAGCTAAAACCATTGTCTGAACAGTTTATGTGGCtacagtggttcaactgtaatcatatgaagctgcTGATACACCTTTGTCTGCCAAAAAACTATAAATACAAATTAGTTTGATAATGTTTTCTCTTCTGCATCAGGTCAGGGTACATGTTTTCTACAGGCAGTATGATATTTTGTCAGAGTCATATTACCTGTAGTAAATGCACACCCCAATCTGATGTTGAAGGGCAAACAAAGCTGTTTTTACAGTTCTTTTTTTGGTGTTCTTGGAGCAtcgtatgattacagttaaaCCACTGAGGACACTCCTTGtctccttttctggactttgagcacCTCAGGACCATTCCTGTCAGTGGAGCATGAGGGAACTCGCAGATTTATTCTAAAATGTCCTAATTTGAGttaatttttttggtgaactaataATTTAAATAGGACCAATCTTTTCTCAGATGTACAGTTACTAACCTTTGTTCTCTTTCTCTTTAGCCTGGCTGTTCCAACCTTGTGTGTAAAGAAGCAGCATATCTGAACATGCTGAAACACCCTTCAGCAAGCATGCACGTGATAGAAATGTATGAGTGGTTTGATCAAGATGGGTTCATTTCACTCGTCATGGAGTACCCCCAACCTTGTGTATCTCTGCGGGACTATATATACATGCATGGCAAGCTGAAAGAACCGGTCGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATCCAGCACTGCGTTGAGCATGGTGTTTCCCACAACGACATGCATGCTGACAACATCCTAGTCAACACAACGAAAGTGGAGCTCAAGCTGATTGACTTTGGCTGTGCTACCAAAATCTGGGCAGAAGATTATGAAAGTGTCGTCTTGACATACATCTGGACCATAGGCTACATGCTGTATTACATGGTGAATGGTAAATATCCAGTGTACAGAACTTCTGGAACGGAGCGCCGCCGTTTGTTTGGTCCCAAAGTATCCAGTGACTGCTGTGATCTGATAGAAAAGTGCCTGGATAACAAATTGTCAAGACTGGTGGACATCTTACAGCACAAGTGGATGAAGAATCAGGAGATGAAGAAGGGATGA

Function

symbol description
pimr204 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within negative regulation of apoptotic process and protein phosphorylation.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000058683

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006601 False 1133 mRNA 0.45 6 16137302 16141536
TCONS_00006602 False 637 mRNA 0.46 3 16137771 16140049
TCONS_00006603 True 1285 mRNA 0.41 2 16138065 16140049

Neighbor

gene id symbol gene type direction distance location
XLOC_003368 ctbs coding upstream 53694 16070438 ~ 16083608 (+)
XLOC_003367 agtrap coding upstream 73011 16040517 ~ 16064291 (+)
XLOC_003366 draxin coding upstream 124188 15931188 ~ 16013114 (+)
XLOC_003365 pank4 coding upstream 221514 15878343 ~ 15915788 (+)
XLOC_003364 FP003590.2 coding upstream 268846 15821433 ~ 15868456 (+)
XLOC_003371 tada3l coding downstream 10780 16152316 ~ 16179190 (+)
XLOC_003372 slc25a26 coding downstream 75373 16216909 ~ 16324575 (+)
XLOC_003373 kbtbd8 coding downstream 433089 16574625 ~ 16588044 (+)
XLOC_003374 NA coding downstream 951542 17093078 ~ 17170177 (+)
XLOC_003375 CR769769.1 coding downstream 996312 17137848 ~ 17141887 (+)
XLOC_003369 CR854846.2 misc upstream 14220 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 3425306 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 3443039 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 3451703 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 3457274 12679732 ~ 12680028 (+)
XLOC_003363 FP016142.2 non-coding upstream 335906 15799383 ~ 15801396 (+)
XLOC_003362 FP016142.6 non-coding upstream 358051 15776072 ~ 15779251 (+)
XLOC_003359 NA non-coding upstream 795889 15339344 ~ 15341413 (+)
XLOC_003358 CR550302.2 non-coding upstream 1118778 15017185 ~ 15018524 (+)
XLOC_003376 CR631124.1 non-coding downstream 1187029 17328565 ~ 17328681 (+)
XLOC_003377 BX571952.1 non-coding downstream 1299055 17440591 ~ 17513632 (+)
XLOC_003378 CR589944.3 non-coding downstream 1777607 17919143 ~ 17920013 (+)

Expression


Co-expression Network