RNA id: TCONS_00006603


Basic Information

Item Value
RNA id TCONS_00006603
length 1285
RNA type mRNA
GC content 0.41
exon number 2
gene id XLOC_003370
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 16137302 ~ 16141536 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAAGTACTAAAGCAGGGTAAAGTACATGTAAAGGATAAGTTTGCCCAAGCATTAAATCATTGTTTACTTACCCTGTGATTCTAATCCTCTGAGACCTTTGTTCCTCCTCAAAACCcaaaagatattttagattaaatttgaGCTCGCTCTTCTGCTATAGATGGCAAGGGTCCTGAGAAGCTCAAATCCAGAAAAGGAGCTAAAACCATTGTCTGAACAGTTTATGTGGCtacagtggttcaactgtaatcatatgaagctgcTGATACACCTTTGTCTGCCAAAAAACTATAAATACAAATTAGTTTGATAATGTTTTCTCTTCTGCATCAGGTCAGGGTACATGTTTTCTACAGGCAGTATGATATTTTGTCAGAGTCATATTACCTGTAGTAAATGCACACCCCAATCTGATGTTGAAGGGCAAACAAAGCTGTTTTTACAGTTCTTTTTTTGGTGTTCTTGGAGCAtcgtatgattacagttaaaCCACTGAGGACACTCCTTGtctccttttctggactttgagcacCTCAGGACCATTCCTGTCAGTGGAGCATGAGGGAACTCGCAGATTTATTCTAAAATGTCCTAATTTGAGttaatttttttggtgaactaataATTTAAATAGGACCAATCTTTTCTCAGATGTACAGTTACTAACCTTTGTTCTCTTTCTCTTTAGCCTGGCTGTTCCAACCTTGTGTGTAAAGAAGCAGCATATCTGAACATGCTGAAACACCCTTCAGCAAGCATGCACGTGATAGAAATGTATGAGTGGTTTGATCAAGATGGGTTCATTTCACTCGTCATGGAGTACCCCCAACCTTGTGTATCTCTGCGGGACTATATATACATGCATGGCAAGCTGAAAGAACCGGTCGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATCCAGCACTGCGTTGAGCATGGTGTTTCCCACAACGACATGCATGCTGACAACATCCTAGTCAACACAACGAAAGTGGAGCTCAAGCTGATTGACTTTGGCTGTGCTACCAAAATCTGGGCAGAAGATTATGAAAGTGTCGTCTTGACATACATCTGGACCATAGGCTACATGCTGTATTACATGGTGAATGGTAAATATCCAGTGTACAGAACTTCTGGAACGGAGCGCCGCCGTTTGTTTGGTCCCAAAGTATCCAGTGACTGCTGTGATCTGATAGAAAAGTGCCTGGATAACAAATTGTCAAGACTGGTGGACATCTTACAGCACAAGTGGATGAAGAATCAGGAGATGAAGAAGGGATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000188616

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006597 lncRNA upstream 92440 16040587 ~ 16045625 (+) False XLOC_003367
TCONS_00006595 lncRNA upstream 162217 15972519 ~ 15975848 (+) True XLOC_003366
TCONS_00006585 lncRNA upstream 336669 15799383 ~ 15801396 (+) True XLOC_003363
TCONS_00006584 lncRNA upstream 358814 15776072 ~ 15779251 (+) True XLOC_003362
TCONS_00006583 lncRNA upstream 360845 15776072 ~ 15777220 (+) False XLOC_003362
TCONS_00008579 lncRNA downstream 953029 17093078 ~ 17170177 (+) True XLOC_003374
TCONS_00006611 lncRNA downstream 997799 17137848 ~ 17141076 (+) False XLOC_003375
TCONS_00006612 lncRNA downstream 997803 17137852 ~ 17141052 (+) False XLOC_003375
TCONS_00006613 lncRNA downstream 997803 17137852 ~ 17141887 (+) False XLOC_003375
TCONS_00006614 lncRNA downstream 998391 17138440 ~ 17141882 (+) False XLOC_003375
TCONS_00006598 mRNA upstream 73774 16040680 ~ 16064291 (+) True XLOC_003367
TCONS_00006596 mRNA upstream 75152 16040517 ~ 16062913 (+) False XLOC_003367
TCONS_00006593 mRNA upstream 124951 15931188 ~ 16013114 (+) False XLOC_003366
TCONS_00006594 mRNA upstream 132080 15931222 ~ 16005985 (+) False XLOC_003366
TCONS_00006592 mRNA upstream 222277 15890984 ~ 15915788 (+) True XLOC_003365
TCONS_00006604 mRNA downstream 12267 16152316 ~ 16166040 (+) False XLOC_003371
TCONS_00006605 mRNA downstream 13158 16153207 ~ 16166705 (+) False XLOC_003371
TCONS_00006606 mRNA downstream 26068 16166117 ~ 16179190 (+) False XLOC_003371
TCONS_00006607 mRNA downstream 26071 16166120 ~ 16177207 (+) True XLOC_003371
TCONS_00006608 mRNA downstream 76860 16216909 ~ 16324575 (+) False XLOC_003372
TCONS_00006600 other upstream 14983 16122786 ~ 16123082 (+) True XLOC_003369
TCONS_00006599 other upstream 54457 16070438 ~ 16083608 (+) True XLOC_003368
TCONS_00006591 other upstream 235870 15886970 ~ 15902195 (+) False XLOC_003365
TCONS_00006578 other upstream 1119541 15017185 ~ 15018524 (+) False XLOC_003358
TCONS_00006572 other upstream 1697239 14431365 ~ 14440826 (+) False XLOC_003353
TCONS_00006621 other downstream 1188516 17328565 ~ 17328681 (+) True XLOC_003376
TCONS_00006622 other downstream 1300542 17440591 ~ 17497093 (+) False XLOC_003377
TCONS_00006623 other downstream 1301258 17441307 ~ 17494543 (+) False XLOC_003377
TCONS_00006624 other downstream 1301838 17441887 ~ 17494277 (+) False XLOC_003377
TCONS_00006625 other downstream 1301838 17441887 ~ 17500788 (+) False XLOC_003377