XLOC_033885 (zdhhc1)


Basic Information

Item Value
gene id XLOC_033885
gene name zdhhc1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 35191220 ~ 35212947 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066294
AACCATGTAACGGTTTTCCCGGATGTAGGTGCGTCGGTCAGCTATTAATTACACAAATTGTCACTGTATGCCGAAAATACTGGATTTACTATCGCTGCTGTAATATAAAACCTTTGTTTATTGGTGTTTGTGCAGTCTCTTAAGCAGACTGGATTGTTTAGATAGATAAAACGCTTTGTATGTAGATCGAGAACCATCGTAAGATGTGATTTGTTTGCAGAATGATTAGTTAACAGCAGTCAATCGTGTTCTCCGCGCacaactaacgttaacgttagcgGTTAATATTTGGTCAGTCACAAATGTTTTATTGGTTTGGTGCACTGTGGCAAGTTAATCAGTATATCTAGAAGAGATTAGTTACCTCGGAATGAAAGCGTGATGATAGATTTGGGTTAGTGAGACGCCCGCTTGGATCTCAGGCTACAGGTATACGTTAGTGAATGAGTAAAGACAGGGCTAACGTTAGTGGTCACCCAGAGCTAATGTTATTGTGTTTGTGCCGTGGATGAGTGAGGGTCAAAGATGACTCCGGTTAGTGGTAGTTTTCATGTAAAGAAAAAGCAGTGCAGGTAATGTTGGCTGAATCCTGTCATCAGTAACGGAGCAGTGGCAGGCGTGACAGAAGGAGGCTCCCCTCTCATGGATGTCTGCAGTAAGAACTCCAATCGCACGGCCCCAGTAAGTGAGGGGGGAATCAGGAGAGCCGATGTTCCCCTTTGCTCTCGGACCAATGGATGGAGCTGGCCTCCACACCCTTTCCAGTTCCTGGCCTGGCTGCTTTATCTCTACTTTGCTGTCACTGGTTTTGGTGTATTTGTTCCTCTGCTCCCCACACACTGGATTCCAGCCGGATATATTTGCACAGGGATTACGTTTGTGTGTCACCTCTTCATGCACCTCATGGCTGTCTCCATTGACCCTGCAGACTATAATGTCAGAGCTAAGAGTTATAAAGGACCCATGCCGGTGTTTGACCGCACCAAACATGCACACGTCATCGAGAACTGTCACTGCTACCTCTGTGAAGTAGATGTTGGCCCTAAATCAAAACACTGTAGTGCGTGTAATAAGTGTGTGGCAAGCTTTGACCACCACTGTCGATGGCTGAACAATTGTGTGGGCAGCAGAAACTACTGGCTCTTCCTCAACAGTGTGATTTCTGCTCTGCTGGGGATTGTTTTGGTTGTAGTTATTGCTAGTTATGTTTTTATAGAGTTCTTTCTGGACCCATCAAAACTTCGATCTGACAAGCACTTTCAACAGGTAAGGAATGAATCTGTGGTGTGGTTTGTGTTTCTGCCGGTGGCTCCAGTCACCACAGCAGGTCCAGCCATTCCTGCTCTAGCAGGAGTCACCATTGCCCTGGGTCTGCTGTCTGCACTTCTGTTGGGCCATTTACTCTGCTTCCACATATACCTCATGTGGAACAGACTCAGCACATATGAGTATATTGTGCGACAACGGCATCGGCAAGAGGCCGGAGATTCCAGGAAGCCTCCTCCAGAGAATGACTCTGGGGTTCCCAAGTTGAATCTAATCAAGCAGCAGGTCAGTTACAGTGGGACACTCGGCTACACCAACCCTGAAATGGAAGTAGAAGATCCAAAGGCCATGACTTCCCAAGAAGGAGCAGCGCGTTATGGCAATGGCCGGATCAGATGCTCGTCTGAACACATGGATGAAGAAGAACACCTCCCTTCTGTCTTAACTGAGCAAAAAGCATCACCTCATCCTCACAAACACGCACAGaagaaaaaaaggaaagtgCGCAAACTTGCAGCAGAGGTTAACGGCGACATATCCATTGACACCAGCACAGCAAAAGGCCTGCAGAAGACTTCTGCTGAGAAGGAGTCCTCTGTAGCTGCCGCCACTGTGTCCTCTTCTCTCGGTCAACGCTTACCCTTCCCAGCATTCCCCCTGCGGGCCTCTCTCCCTCCTCTTGCCCCCGTACAAGCCGCTGGTCCCCCCGCTGAGTATCATTCTGACTCCGCAGAGTCTCTGGAGGAGATCCCTGTAGCGATGGCTCGGCTTGGCAGTGCAGCCCTGGCTGGAGCTCAGATTCCCACCACCACTGCAACTGCCTCCTCCAGCTACTCCTCCATGCTCCAGTGCGCTTTGCCCTCCTCAGCAGCCGGCCACGCTGCGCCCTCCCCTCAGCCCCGGACCAAGAGGAAAACAGCTGCCCGTACAGTTTCAGAGCAGAGGTTTGAGATGCTGTACCACAATCCATCAATGTTCATGACTCGAGAAAGCGGAGAACCAGCCATTCCTCCAGAGGAGAGTCCTCGAGCAGCGAAACGCAAACAGACAGGTAAAAAGAGAAATACTGAAGACGCTAAGCCCAGTTCCAGAGTAGGAACCTCACTGGCGTAGTGAACACTATACACTACAGAGACATCTGGACACATTGGGCACTTGCTCTGCCTTGCTTCTATGTTAAAAAGCTTGAAGATAAGCTGATTTGGTAGGATCAGATACAAACTGATGTAGCCTATGCAAACACCACTGAACGTCAGCAATGAGGGTGGAAAGAATGTCTAATGCTGGTTGTCATTGGTCATTCTTAACTGCCCATATTGCATTAAGTTGCAGATAAATGCGTTTGACAGAGTCTCCAATCAGAATCacttatactgtatgtatttaacTTTGGTAAAGTGATTGTTAAGCCTTGGACTTGGGCCTTATATGAATATGAATTAGGCCGCTATATGAATCATATACTTGTGTAACTTTTATGAATTACAGTGCATTTCACTATGACTTTGTTGTAGCATTAACTGtacttaaagggatggtttactcaacatttttatttactctCCATTCACTCACACTTAGAAGGTTCTAAtctttttatgaatttctttcttgtgatgaacacaaaacaagatattctgaagagtgTTGGAAAACAGCAGCCATCGACATCCATagcataaacaaaaatacaatggaagtcaatggctgtatgttttcttttgtgtttaatagaagaaataaACTCGCAtgagtttggaacaagtggaggttGAGTGAATGAATTTTCATTCTGTCCCTTTACTGCAGTGCTGCacttttacctatttatttatgtatgttaaATGCCAAAGTTCATTTAGTTTTCTATGATGAAACACCCGACCACTGATATTAATTTTCAGggattttagtccatatttatatattattgttcattaagttatcttattttttaattattgttgttatatttttataagcTTTTACTTGTCTGGTTGTTTGAATGCGATCAAGTTGTGATTGGGTGAACATAAGGTATGTACAACAGATTTTACTTCTAGTGGTATATGAATGTAATGTCATTTCTGTCATTCCACTTCAAGTACTTACTCAAGTGCTTTAGTCACTTTTATATGACGCAGTGCCACACGATGTAGGCATTTGTGATTGTAGTTCACTCCCTCCATCTCAAATGCTGCTCTGACAACCCAATATCATTGTGTTCAATCTGTGAAGTCAGACATCGTTGGTACATGATGTTTTGGGTGGAGGGAGTGGTTAAATCATGGCATGATAAGAAAGCAATATGaacttgttttatttctttatttaaaaaaatgaaataaaatcaatttcTTTTTATCTGTTTTGCAACATGTCATCAATGGTTGTatgttatttgcatttatttacatgtatttatttatttatttttgtaaaattgcCAAAAAGccaataaactttaataaaatactaCACTGCAGAAGACGTTGGTAGGTAAAATTGTAATTTTCAATCTAGACCCACATTAAATTAAGACTATAAGCAGAAAATGACTCTAAGGCTCAGGCTATGTTTGTTTGAATAAGAATACTagtttacagtgtttatttaaaataataaatgtaaatatgagaCCTGATTAAACAACTTGTGCCTTCCAgtactttttttccccctcaaacCTACGGTCAGGATTTACTAATAAAATGCAGTAAAacaat
>TCONS_00066295
TGGCAGGCGTGACAGAAGGAGGCTCCCCTCTCATGGATGTCTGCAGTAAGAACTCCAATCGCACGGCCCCAGTAAGTGAGGGGGGAATCAGGAGAGCCGATGTTCCCCTTTGCTCTCGGACCAATGGATGGAGCTGGCCTCCACACCCTTTCCAGTTCCTGGCCTGGCTGCTTTATCTCTACTTTGCTGTCACTGGTTTTGGTGTATTTGTTCCTCTGCTCCCCACACACTGGATTCCAGCCGGATATATTTGCACAGGGATTACGTTTGTGTGTCACCTCTTCATGCACCTCATGGCTGTCTCCATTGACCCTGCAGACTATAATGTCAGAGCTAAGAGTTATAAAGGACCCATGCCGGTGTTTGACCGCACCAAACATGCACACGTCATCGAGAACTGTCACTGCTACCTCTGTGAAGTAGATGTTGGCCCTAAATCAAAACACTGTAGTGCGTGTAATAAGTGTGTGGCAAGCTTTGACCACCACTGTCGATGGCTGAACAATTGTGTGGGCAGCAGAAACTACTGGCTCTTCCTCAACAGTGTGATTTCTGCTCTGCTGGGGATTGTTTTGGTTGTAGTTATTGCTAGTTATGTTTTTATAGAGTTCTTTCTGGACCCATCAAAACTTCGATCTGACAAGCACTTTCAACAGGTAAGGAATGAATCTGTGGTGTGGTTTGTGTTTCTGCCGGTGGCTCCAGTCACCACAGCAGGTCCAGCCATTCCTGCTCTAGCAGGAGTCACCATTGCCCTGGGTCTGCTGTCTGCACTTCTGTTGGGCCATTTACTCTGCTTCCACATATACCTCATGTGGAACAGACTCAGCACATATGAGTATATTGTGCGACAACGGCATCGGCAAGAGGCCGGAGATTCCAGGAAGCCTCCTCCAGAGAATGACTCTGGGGTTCCCAAGTTGAATCTAATCAAGCAGCAGGTCAGTTACAGTGGGACACTCGGCTACACCAACCCTGAAATGGAAGTAGAAGATCCAAAGGCCATGACTTCCCAAGAAGGAGCAGCGCGTTATGGCAATGGCCGGATCAGATGCTCGTCTGAACACATGGATGAAGAAGAACACCTCCCTTCTGTCTTAACTGAGCAAAAAGCATCACCTCATCCTCACAAACACGCACAGaagaaaaaaaggaaagtgCGCAAACTTGCAGCAGAGGTTAACGGCGACATATCCATTGACACCAGCACAGCAAAAGGCCTGCAGAAGACTTCTGCTGAGAAGGAGTCCTCTGTAGCTGCCGCCACTGTGTCCTCTTCTCTCGGTCAACGCTTACCCTTCCCAGCATTCCCCCTGCGGGCCTCTCTCCCTCCTCTTGCCCCCGTACAAGCCGCTGGTCCCCCCGCTGAGTATCATTCTGACTCCGCAGAGTCTCTGGAGGAGATCCCTGTAGCGATGGCTCGGCTTGGCAGTGCAGCCCTGGCTGGAGCTCAGATTCCCACCACCACTGCAACTGCCTCCTCCAGCTACTCCTCCATGCTCCAGTGCGCTTTGCCCTCCTCAGCAGCCGGCCACGCTGCGCCCTCCCCTCAGCCCCGGACCAAGAGGAAAACAGCTGCCCGTACAGTTTCAGAGCAGAGGTTTGAGATGCTGTACCACAATCCATCAATGTTCATGACTCGAGAAAGCGGAGAACCAGCCATTCCTCCAGAGGAGAGTCCTCGAGCAGCGAAACGCAAACAGACAGGTAAAAAGAGAAATACTGAAGACGCTAAGCCCAGTTCCAGAGTAGGAACCTCACTGGCGTAGTGAACACTATACACTACAGAGACATCTGGACACATTGGGCACTTGCTCTGCCTTGCTTCTATGTTAAAAAGCTTGAAGATAAGCTGATTTGGTAGGATCAGATACAAACTGATGTAGCCTATGCAAACACCACTGAACGTCAGCAATGAGGGTGGAAAGAATGTCTAATGCTGGTTGTCATTGGTCATTCTTAACTGCCCATATTGCATTAAGTTGCAGATAAATGCGTTTGACAGAGTCTCCAATCAGAATCacttatactgtatgtatttaacTTTGGTAAAGTGATTGTTAAGCCTTGGACTTGGGCCTTATATGAATATGAATTAGGCCGCTATATGAATCATATACTTGTGTAACTTTTATGAATTACAGTGCATTTCACTATGACTTTGTTGTAGCATTAACTGtacttaaagggatggtttactcaacatttttatttactctCCATTCACTCACACTTAGAAGGTTCTAAtctttttatgaatttctttcttgtgatgaacacaaaacaagatattctgaagagtgTTGGAAAACAGCAGCCATCGACATCCATagcataaacaaaaatacaatggaagtcaatggctgtatgttttcttttgtgtttaatagaagaaataaACTCGCAtgagtttggaacaagtggaggttGAGTGAATGAATTTTCATTCTGTCCCTTTACTGCAGTGCTGCacttttacctatttatttatgtatgttaaATGCCAAAGTTCATTTAGTTTTCTATGATGAAACACCCGACCACTGATATTAATTTTCAGggattttagtccatatttatatattattgttcattaagttatcttattttttaattattgttgttatatttttataagcTTTTACTTGTCTGGTTGTTTGAATGCGATCAAGTTGTGATTGGGTGAACATAAGGTATGTACAACAGATTTTACTTCTAGTGGTATATGAATGTAATGTCATTTCTGTCATTCCACTTCAAGTACTTACTCAAGTGCTTTAGTCACTTTTATATGACGCAGTGCCACACGATGTAGGCATTTGTGATTGTAGTTCACTCCCTCCATCTCAAATGCTGCTCTGACAACCCAATATCATTGTGTTCAATCTGTGAAGTCAGACATCGTTGGTACATGATGTTTTGGGTGGAGGGAGTGGTTAAATCATGGCATGATAAGAAAGCAATATGaacttgttttatttctttatttaaaaaaatgaaataaaatcaatttcTTTTTATCTGTTTTGCAACATGTCATCAATGGTTGTatgttatttgcatttatttacatgtatttatttatttatttttgtaaaattgcCAAAAAGccaataaactttaataaaatactaCACTGCAGAAGACGTTGGTAGGTAAAATTGTAATTTTCAATCTAGACCCACATTAAATTAAGACTATAAGCAGAAAATGACTCTAAGGCTCAGGCTATGTTTGTTTGAATAAGAATACTagtttacagtgtttatttaaaataataaatgtaaatatgagaCCTGATTAAACAACTTGTGCCTTCCAgtactttttttccccctcaaacCTACGGTCAGGATTTACTAATAAAATGCAGTAAAacaataatgatttttttgtgtgtctgaTTGACTATAATGCATAGGTGTTTCTATTTCAGATGCTATTTTATGAGAGGAGAGAGTATCAGTCGACATGAAAGTTTGCAATAGTTATTTTCTGATGATTGCACAGATATGGAGGTTGagtg

Function

symbol description
zdhhc1 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be located in Golgi apparatus; endoplasmic reticulum membrane; and endosome membrane. Predicted to be integral component of membrane. Orthologous to human ZDHHC1 (zinc finger DHHC-type containing 1).

GO:

id name namespace
GO:0005768 endosome cellular_component
GO:0005783 endoplasmic reticulum cellular_component
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0010008 endosome membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016409 palmitoyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0019706 protein-cysteine S-palmitoyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-130925-1 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be located in Golgi apparatus; endoplasmic reticulum membrane; and endosome membrane. Predicted to be integral component of membrane. Orthologous to human ZDHHC1 (zinc finger DHHC-type containing 1).

Ensembl:

ensembl_id ENSDARG00000077546

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066294 False 3992 mRNA 0.43 11 35191220 35212803
TCONS_00066295 True 3526 mRNA 0.43 10 35193832 35212947

Neighbor

gene id symbol gene type direction distance location
XLOC_033884 atp6v0d1 coding upstream 96287 35086369 ~ 35094933 (+)
XLOC_033883 ctrb1 coding upstream 111921 35075847 ~ 35079299 (+)
XLOC_033882 zgc:136461 coding upstream 121413 35068036 ~ 35069807 (+)
XLOC_033881 ddx28 coding upstream 225566 34963748 ~ 34965654 (+)
XLOC_033880 NA coding upstream 362669 34823505 ~ 34828551 (+)
XLOC_033886 tppp3 coding downstream 16698 35229645 ~ 35243976 (+)
XLOC_033887 amfrb coding downstream 32660 35245607 ~ 35282097 (+)
XLOC_033888 NA coding downstream 135539 35348486 ~ 35351777 (+)
XLOC_033889 NA coding downstream 222299 35435246 ~ 35763213 (+)
XLOC_033890 NA coding downstream 613458 35826405 ~ 35828249 (+)
XLOC_033870 NA non-coding upstream 720926 34453117 ~ 34470294 (+)
XLOC_033869 NA non-coding upstream 773713 34417066 ~ 34417507 (+)
XLOC_033866 NA non-coding upstream 902761 34284567 ~ 34288459 (+)
XLOC_033863 NA non-coding upstream 1003865 34163775 ~ 34187355 (+)
XLOC_033892 NA non-coding downstream 1158904 36371851 ~ 36392692 (+)
XLOC_033893 NA non-coding downstream 1240961 36453908 ~ 36454279 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_08421799_08434134 ZDHHC1 coding CI01000026 null 8421683 ~ 8434193 (+)