XLOC_035456 (mon1ba)


Basic Information

Item Value
gene id XLOC_035456
gene name mon1ba
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 9684479 ~ 9700640 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069580
TTCAGTCTACAAATATGTTTGTCATTCTGTTTGGTCTGATAGGACCGAGCTTTAAATGACTTTCCATTCtacataaacatttatatatatatatatatatatagtaaaaagtgTGTATAAAAGACTTACGCTGAACTCGGAGGATATGAGCTGGTCTCCGCTTCTGTCATGGTTGGACAAACAGTTGACCCGCTTTACAAAGCTCAACAGGCATCATGTGATTCCTTATTCCAGCTCGAGTAATGGAGGGCCACAGAGATCCATTGTGTGACATCAGTAGCAGCACCCTTAAACAACACACCAAATGCAGACACACAGAAGATTCTCACTTTGAGGGGAAATGAGAAATTCACAACATGCACAGGAATAGAGGAAGCTGGGGGTTTCAGCCTGAGGACACCTTGATAGAGGACTCTGGTGAGTTTCCATCAAGCCTGGAGCTCAATGGGCAGAAGACTGAGCTGTTGGCTGGTTGCGCTATGGATGTTCCAGGTCTGTCCCACCGGAATGAAGATGTAACGTCTGAAAGCTGGAGGAAACACAGAAAGCATGTGTTTGTGCTGAGCGATGCAGGGAAGCCCATTTACTCCCGCTATGGTAATGAAGAGGCCCTTTCCTCCACCATGGGTGTGATGATGGCGCTGGTCTCCTTCGTTCAGGCTGGAGGAAACACCATCCAATCAATATTTTCAGATGAGCACACGGTGGTGTTTTTACAGCAGGGCCCTCTGGTGTTTGTTTCTGTCTCCACAACTCATCAATCAGAGCAGCAGCTGCGCGGTGAACTCCTCCATGTCTATCATCAGATAGTCAGCATGCTTACACAGGCCAGCATAAAACGCATCTTTGAGCACCGCAAGAACTATGACCTGCGGCGCCTGCTGTTTGGCTCTGAGAGGGTCCTGGACAGCCTTCTGGACGTCATGGACTTTGATCCCAGCTTCATGTTATCAGCAGTCCAGTGTTTACCCCTGCCGTCTTCTTCAAGAGACATCCTCAGTAACATCCTACAGAAATCCATCACCCCCAATCTGGTATTCTCCTTTCTCATTGCACAAAACCGGCTTGTGTCCATCGTTCAGGAGAAGACAGTCGCGGAGGACACTAGACTAAAACCCAGTGACCTTCATCTTCTCTTAAACCTCATCAGGGCATCTTCTGCTTTTCAGGCCGGAGAGATTTGGATGCCCATCTGCCTGCCCCTGTTCAATCATGACTGCTACTTTTATGCCTACGTGGCGAATCTAGACCCTCCTGAATGCACCATATGCCTTGTGCTTCTTTCAACAGATAAAGAAGCTTTTTATGCCATGGCAGAGTGCAAACGGAAAATCGAGCAAGCTTTCATGTCTCAGAATGCCTTGGAGTGTGTGGCAAACAGTCAGATGTACTGTGTTGAGGATGTCGGTGTAAATAATCTCAGACACTTTTTGTACAAGCCTTCAAATGTGATGGAACATCATCGCCAGCTCCCACAGTTTACATGCCCAGAGATGGCCGTGCCCTACAAAAGCCAGGAAGAGAGGATACGACTGCTGGATCTGTATCGCAACATGCACAATCGTATCCACAGTACATCACGGCCTCTCAAGCTCATCTACCATTCTGCAGACGGAGAAACTCTGCTGGCTTGGGTCACAGGCAAGTTTGAGATGTATGCTTGTTTTACATCACTTGTCACAAAGAAATCAGCAATCAGTGAATTGACAAAATTGCTGCGGTGGATCAAAAAGGAAGAGGATCGTCTCTTTATTTGTCACCTTCCAAAATACTCCACT
>TCONS_00069581
gtcggccaagctTTAACTTCTGTGTGTACTCCTGGTCAAAATCTTAAGACTGGGGGAAACATTTCAAGTATTCACATTTTGCACTGGTATGAGCACACGGTGGTGTTTTTACAGCAGGGCCCTCTGGTGTTTGTTTCTGTCTCCACAACTCATCAATCAGAGCAGCAGCTGCGCGGTGAACTCCTCCATGTCTATCATCAGATAGTCAGCATGCTTACACAGGCCAGCATAAAACGCATCTTTGAGCACCGCAAGAACTATGACCTGCGGCGCCTGCTGTTTGGCTCTGAGAGGGTCCTGGACAGCCTTCTGGACGTCATGGACTTTGATCCCAGCTTCATGTTATCAGCAGTCCAGTGTTTACCCCTGCCGTCTTCTTCAAGAGACATCCTCAGTAACATCCTACAGAAATCCATCACCCCCAATCTGGTATTCTCCTTTCTCATTGCACAAAACCGGCTTGTGTCCATCGTTCAGGAGAAGACAGTCGCGGAGGACACTAGACTAAAACCCAGTGACCTTCATCTTCTCTTAAACCTCATCAGGGCATCTTCTGCTTTTCAGGCCGGAGAGATTTGGATGCCCATCTGCCTGCCCCTGTTCAATCATGACTGCTACTTTTATGCCTACGTGGCGAATCTAGACCCTCCTGAATGCACCATATGCCTTGTGCTTCTTTCAACAGATAAAGAAGCTTTTTATGCCATGGCAGAGTGCAAACGGAAAATCGAGCAAGCTTTCATGTCTCAGAATGCCTTGGAGTGTGTGGCAAACAGTCAGATGTACTGTGTTGAGGATGTCGGTGTAAATAATCTCAGACACTTTTTGTACAAGCCTTCAAATGTGATGGAACATCATCGCCAGCTCCCACAGTTTACATGCCCAGAGATGGCCGTGCCCTACAAAAGCCAGGAAGAGAGGATACGACTGCTGGATCTGTATCGCAACATGCACAATCGTATCCACAGTACATCACGGCCTCTCAAGCTCATCTACCATTCTGCAGACGGAGAAACTCTGCTGGCTTGGGTCACAGGCAAGTTTGAGATGTATGCTTGTTTTACATCACTTGTCACAAAGAAATCAGCAATCAGTGAATTGACAAAATTGCTGCGGTGGATCAAAAAGGAAGAGGATCGTCTCTTTATTTGTCACCTTCCAAAATACTCCACTACTTCACAAGCTTTATTGTctggtatgttcacacatacgaggaatttgttttcgtga

Function

symbol description
mon1ba Predicted to act upstream of or within protein targeting to vacuole and vesicle-mediated transport. Orthologous to human MON1B (MON1 homolog B, secretory trafficking associated).

GO:

id name namespace
GO:0006623 protein targeting to vacuole biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-318 Predicted to act upstream of or within protein targeting to vacuole and vesicle-mediated transport. Orthologous to human MON1B (MON1 homolog B, secretory trafficking associated).

Ensembl:

ensembl_id ENSDARG00000035686

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069580 False 1778 mRNA 0.47 5 9684479 9695568
TCONS_00069581 True 1230 mRNA 0.47 6 9688966 9700640

Neighbor

gene id symbol gene type direction distance location
XLOC_035455 pnck coding upstream 517364 9149436 ~ 9167115 (+)
XLOC_035454 BX284664.1 coding upstream 573289 9111072 ~ 9111190 (+)
XLOC_035453 bcap31 coding upstream 655304 8973425 ~ 9029175 (+)
XLOC_035452 slc35a2 coding upstream 726800 8947623 ~ 8957679 (+)
XLOC_035451 si:dkey-83k24.5 coding upstream 742023 8936912 ~ 8942456 (+)
XLOC_035458 NA coding downstream 94228 9794868 ~ 9796429 (+)
XLOC_035459 NA coding downstream 154098 9854738 ~ 9860610 (+)
XLOC_035460 kcnd1 coding downstream 165711 9866351 ~ 9986978 (+)
XLOC_035461 CT573497.1 coding downstream 193032 9893672 ~ 9893788 (+)
XLOC_035462 si:dkey-8e10.2 coding downstream 301165 10001805 ~ 10013552 (+)
XLOC_035442 CU928118.1 non-coding upstream 1362883 8321482 ~ 8321596 (+)
XLOC_035435 NA non-coding upstream 1834685 7824772 ~ 7849794 (+)
XLOC_035432 CR385024.1 non-coding upstream 2032509 7644265 ~ 7651970 (+)
XLOC_035431 NA non-coding upstream 2088385 7587459 ~ 7596094 (+)
XLOC_035463 CU928205.1 non-coding downstream 367632 10068272 ~ 10074129 (+)
XLOC_035464 NA non-coding downstream 467885 10168525 ~ 10173228 (+)

Expression


Co-expression Network