XLOC_035458


Basic Information

Item Value
gene id XLOC_035458
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 9794868 ~ 9796429 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072142
ttgacataagaaagaaactcgtaaagtgttaattaataaataatgacagaatttccatttttgggtgatctatccctttaaatgtggcttttatttagctatttaaagACCATATTAGATCCAATGAATCTTGACCAAACCAATATAAGATAATTAATTGTTTAGTACATGTATTGAAAGTTTTAATGACATAAGATTATACGTTTAGCATCCATCTTATCCGTCAACGGTTTTGTATTGATTTAGAGATAAGTCTGGATATGTACttatatttttttgatttgtAAGATGTGAACGATTACTATTGCTTTAAGCTTTATCACGCGAACGGTTCTTGAGCGTTGCGTTTGTGCATGGTGCGTTAAATGCCTGTCCAATCCCTTCCTCTGGCTTCTGAAGGTAATCCTGACGAAATGCTTTTCTATATTCCATTCATTTTTAATCCTCCAGTGGGAAAATGCTAATCTTTAATTTTCACCTTAGAGGAAACTGACATATCAGCATTCACTTGGACCATTCTGCGCAAAAGGATGAAGGATGTTTGCCTTTGAAGCTCCagagttgttattatttttgcctTTGTACTCTTCTAATCTAATCTGCCAAACGAGCTCTTCTTTAATTAGGAATCGTCAGCTAATCATCACTAATTACATGTAAACAGATTCTATTAATAATGTCCGATCTCCCACTACGTCTGTACGGCTAATATTTATTCATGTGCATTTCATGGTCATGTTGGGACTTTCATAACTTGCAGTGATAATAAAGAATGGCTGGAAACACTAATGTCTGCGTGTCAGGCtttctgatgtgtgtgtgattgatttGACggatttttttaattgtgtaccTCTTTGTTATCAGTGCAGGTGTTCCTGAATATGGAACCGGTGGCGTTGCGGGTGAGATGCTGCAGCAGTTGAGCTAGAGGACAATCAGAcaggtttttcttttttgaaa

Function

GO:

id name namespace
GO:0090344 negative regulation of cell aging biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072142 True 963 lncRNA 0.36 2 9794868 9796429

Neighbor

gene id symbol gene type direction distance location
XLOC_035457 gripap1 coding upstream 2598 9699111 ~ 9792270 (+)
XLOC_035456 mon1ba coding upstream 94228 9684479 ~ 9700640 (+)
XLOC_035455 pnck coding upstream 627753 9149436 ~ 9167115 (+)
XLOC_035454 BX284664.1 coding upstream 683678 9111072 ~ 9111190 (+)
XLOC_035453 bcap31 coding upstream 765693 8973425 ~ 9029175 (+)
XLOC_035459 NA coding downstream 58309 9854738 ~ 9860610 (+)
XLOC_035460 kcnd1 coding downstream 69922 9866351 ~ 9986978 (+)
XLOC_035461 CT573497.1 coding downstream 97243 9893672 ~ 9893788 (+)
XLOC_035462 si:dkey-8e10.2 coding downstream 205376 10001805 ~ 10013552 (+)
XLOC_035463 CU928205.1 coding downstream 271843 10068272 ~ 10074129 (+)
XLOC_035442 CU928118.1 non-coding upstream 1473272 8321482 ~ 8321596 (+)
XLOC_035435 NA non-coding upstream 1945074 7824772 ~ 7849794 (+)
XLOC_035432 CR385024.1 non-coding upstream 2142898 7644265 ~ 7651970 (+)
XLOC_035431 NA non-coding upstream 2198774 7587459 ~ 7596094 (+)
XLOC_035464 NA non-coding downstream 372096 10168525 ~ 10173228 (+)
XLOC_035465 NA non-coding downstream 407664 10204093 ~ 10248143 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location