XLOC_035563


Basic Information

Item Value
gene id XLOC_035563
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 18709974 ~ 18733594 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071923
GTTTGGTGAAGGAGTGAACGGAGAGGTGGCTCCAGTGCTGGAAAACATGGACTTTTGCAGAAACCTCTGTTCTTGGCTGGACGAGGAATGGACTGCGGCGTCTGATGCCAGTACGACACTCGATGAGCCCTTCTCTGTTAATGTGGAGAAAACAACCGGGTCACATTTGGAGATCATCAGCTTTTGCAGTGACTTCTGTCCGTGGCTGGACGAAGACTGGACTGCAGCTTCAGATGCCGGTACAGTACCAGATAAGATGCCGGAGGAGATGCCGGATGAGATTTCTCCTCGGGAGAACACTCCAGAGAACGACACAACTGGTGAGATTGTCAGCAACCACTTCACTGTAGAAtagaaacattttattaatgGGAACGATCTCTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071923 True 384 lncRNA 0.49 2 18709974 18733594

Neighbor

gene id symbol gene type direction distance location
XLOC_035562 BX247907.1 coding upstream 39612 18670237 ~ 18670362 (+)
XLOC_035561 fsd1 coding upstream 62611 18624658 ~ 18647363 (+)
XLOC_035560 ccdc181 coding upstream 86870 18615938 ~ 18623104 (+)
XLOC_035559 prrg1 coding upstream 108733 18588551 ~ 18601241 (+)
XLOC_035558 tab3 coding upstream 146995 18545185 ~ 18562979 (+)
XLOC_035564 mpnd coding downstream 97165 18830759 ~ 18840694 (+)
XLOC_035565 CR376858.1 coding downstream 289667 19023261 ~ 19023377 (+)
XLOC_035566 NA coding downstream 494241 19227835 ~ 19232675 (+)
XLOC_035567 mpeg1.2 coding downstream 622478 19356072 ~ 19359834 (+)
XLOC_035568 npl coding downstream 756260 19489854 ~ 19500354 (+)
XLOC_035556 NA non-coding upstream 297946 18410984 ~ 18412028 (+)
XLOC_035551 NA non-coding upstream 741740 17962829 ~ 17968234 (+)
XLOC_035546 NA non-coding upstream 1302894 17368041 ~ 17407080 (+)
XLOC_035542 NA non-coding upstream 1583635 17086991 ~ 17126339 (+)
XLOC_035573 NA non-coding downstream 929860 19663454 ~ 19715690 (+)
XLOC_035576 NA non-coding downstream 946836 19680430 ~ 19682651 (+)
XLOC_035577 NA non-coding downstream 1005409 19739003 ~ 19950333 (+)

Expression


Co-expression Network